GGGenome | Results

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2025-04-08 22:54:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Allium cepa genome assembly, chromosome: 1.
LR994629.1:155015840-155015859

ATTTTTTTTTTTTGGAGCACATTTTACTTA155015840CAAACCCATACACCATGAGGGATAAATAAAAATATTAGCTCTCATCATTT

Rhaphigaster nebulosa genome assembly, chromosome: 4.
OX411310.1:51582595-51582614

GAAGAGGAAAAAATTAATCAATGGCAATTT51582595CAAACCCATACACCATGAGGATTTTTACTCGTGGGAACAGCATTTTCAAG

Allium cepa genome assembly, chromosome: 1.
LR994629.1:155011454-155011473

AAATGATGAGAGCTAATATTTTTATTTATC155011454CCTCATGGTGTATGGGTTTGTAAGTAAAATGTGCTCCAAAAAAAAAAAAT

Athripsodes cinereus genome assembly, chromosome: 4.
OX388308.1:5796677-5796696

CTGGAGAATGCCGTTCCTACCAACAAGAAT5796677CCTCATGGTGTATGGGTTTGATTAGCTTCTAAAATATACAGGGCAACTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.104 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=CAAACCCATACACCATGAGG&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCATGGTGTATGGGTTTG&k=0&no_gap=0&offset=0&limit=48
0.128 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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