GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-17 16:22:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC17m21_039, unspecified EST.
FY460172.1:454-474
GTTTTGTGAAAAGATTTGAAAGAATATGAA454CAAATTCTTCTGATGCGGTTTTTAATGCGGTTACAATACAACCATACACGT
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:30032314-30032334
TTTTTGTGAAAAGATTTGAAAGAATATGAA30032314CAAATTCTTCTGATGCGGTTTTTAATGCGGTTACAATACAACAATATACGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAATTCTTCTGATGCGGTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAATTCTTCTGATGCGGTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.187 | 0.178 | search_plus_done; http://172.18.8.135:50400/match?q=CAAATTCTTCTGATGCGGTTT&k=0&no_gap=0&offset=0&limit=50
0.203 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCGCATCAGAAGAATTTG&k=0&no_gap=0&offset=0&limit=48
0.203 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).