GGGenome | Results

Help | Japanese

2025-04-12 10:22:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH003_00379m, 5' end sequence.
AB450691.1:32-52

TCATTTTATTTTATTTTTCTTTTATTTCAG32CAAATTTCTCTGCCAGGCTCACGCGGGTGTTGATTCTCTCTCTCTCTCTCT

Pyrus communis genome assembly, chromosome: 16.
OY757083.1:336246-336266

TCATTTTATTTTATTTTTCTTTTATTTCAG336246CAAATTTCTCTGCCAGGCTCACGCGGGTGTTGATTCTCTCTCTCTCTCTCT

Ceriagrion tenellum genome assembly, chromosome: 1.
OY720632.1:167359406-167359426

CATTAAAGAGAAACAAGGTTAAGTTTCCTT167359406CAAATTTCTCTGCCAGGCTCATGTGCTTCACTGCCTTCAGAACCTTCTTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.119 | 0.110 | search_plus_done; http://172.18.8.135:50400/match?q=CAAATTTCTCTGCCAGGCTCA&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=TGAGCCTGGCAGAGAAATTTG&k=0&no_gap=0&offset=0&limit=47
0.152 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).