GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:30:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mesorhizobium sp. 131-2-5 DNA, complete genome.
AP023249.1:6278181-6278200
TGCCAAGAACGGCAGCCAGTTCGTCAAGAG6278181CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
Mesorhizobium sp. 131-3-5 DNA, complete genome.
AP023254.1:6337512-6337531
TGCCAAGAACGGCAGCCAGTTCGTCTCGAG6337512CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
Mesorhizobium huakuii 7653R chromosome, complete genome.
CP006581.2:6257282-6257301
TGCCAAGAACGGCAGCCAGTTCGTCAAGAG6257282CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
Mesorhizobium japonicum R7A chromosome, complete genome.
CP033366.1:5848976-5848995
TGCCAAGAACGGCAGCCAGTTCGTCTCGAG5848976CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
Mesorhizobium japonicum R7A chromosome, complete genome.
CP051772.1:5849385-5849404
TGCCAAGAACGGCAGCCAGTTCGTCTCGAG5849385CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
Mesorhizobium japonicum strain R7Astar chromosome, complete genome.
CP051773.1:5849385-5849404
TGCCAAGAACGGCAGCCAGTTCGTCTCGAG5849385CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
Mesorhizobium japonicum strain R7AstarV2 chromosome, complete genome.
CP052769.1:5849378-5849397
TGCCAAGAACGGCAGCCAGTTCGTCTCGAG5849378CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
Mesorhizobium japonicum strain R7ANSstar chromosome, complete genome.
CP052770.1:5849385-5849404
TGCCAAGAACGGCAGCCAGTTCGTCTCGAG5849385CAACAAGGTCGACTACGAAACAGACCCGACAAAGGGTGTCGGGCTTGAGC
GR__Ea15P23.r GR__Ea Gossypium raimondii cDNA clone GR__Ea15P23 3', mRNA sequence.
CO094088.1:608-627
TAAGAATAATTTGGTGGTGGTGGTGGTGTT608TTTCGTAGTCGACCTTGTTGTTCT
Mesorhizobium loti NZP2037 chromosome, complete sequence.
CP016079.1:2649833-2649852
GCTCAAGCCCGACACCCTTTGTCGGGTCTG2649833TTTCGTAGTCGACCTTGTTGCTCTTGACGAACTGGCTGCCGTTCTTGGCA
Mesorhizobium loti strain SU343 chromosome, complete genome.
CP033368.1:2567716-2567735
GCTCAAGCCCGACACCCTTTGTCGGGTCTG2567716TTTCGTAGTCGACCTTGTTGCTCTTGACGAACTGGCTGCCGTTCTTGGCA
Mesorhizobium jarvisii strain ATCC 33669 chromosome, complete genome.
CP033507.1:2567698-2567717
GCTCAAGCCCGACACCCTTTGTCGGGTCTG2567698TTTCGTAGTCGACCTTGTTGCTCTTGACGAACTGGCTGCCGTTCTTGGCA
Micropterix aruncella genome assembly, chromosome: 18.
OX155967.1:24047252-24047271
TTTTACCTCTTTTTCTCAGCAAAGAAAATG24047252TTTCGTAGTCGACCTTGTTGCCGTACCTTTTTGCCTTTTTTCTGAATTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAACAAGGTCGACTACGAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACAAGGTCGACTACGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.120 | 0.111 | search_plus_done; http://172.18.8.135:50400/match?q=CAACAAGGTCGACTACGAAA&k=0&no_gap=0&offset=0&limit=50
0.204 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCGTAGTCGACCTTGTTG&k=0&no_gap=0&offset=0&limit=42
0.208 | 0.003 | cgi_end;

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