GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:15:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Anabas testudineus genome assembly, chromosome: 10.
LR132037.1:6847106-6847125
TAATCATGTTAGTTAGCAAACATGAAAACA6847106CAACAGCAAAAACACTCCCACACTGCTGTTTTATTCACATGGAAAACATG
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 4.
LR884463.1:34564481-34564500
GAGAAACTGGAAGACTCAAGATCGCAGATA34564481CAACAGCAAAAACACTCCCATGTTCTTTGATTGACAGGTGGATCTGGGGG
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 9.
LR884468.1:28248546-28248565
CAAACTTCTTCCCTTCACTGATGAGTGCCA28248546CAACAGCAAAAACACTCCCATTCCACTTTAAGGGGAGTGTGAACCATTGA
Dianthus caryophyllus mRNA, clone: CES22G24, 5' end sequence.
FY390568.1:89-108
AATCCATCCATCCAAACATTGAACACAAAA89CAACAGCAAAAACACTCCCAATTCACAAATTACAAAACAAAATTACAAGA
1094424022609 Global-Ocean-Sampling_GS-34-01-01-1P5-1P8KB marine metagenome genomic clone 1061003686387 3', genomic survey sequence.
ER386192.1:125-144
GTACCAGATACCCAAGCAAACCTACATGAG125CAACAGCAAAAACACTCCCAACAACAATAGCAACCGTCTTCATAGA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:40864604-40864623
TTCAAAATAAGCCATTTTTTTTCAGTTTAC40864604CAACAGCAAAAACACTCCCAGCTTTTTTTCACAGCAGCTTTTTTTTAAAT
Microdon myrmicae genome assembly, chromosome: 1.
OZ007496.1:6024198-6024217
CACAACCTTTACATAAAGAAGCCGGCCGAT6024198CAACAGCAAAAACACTCCCAAAAAAACGCTCTTCATTCAACAAAAATTAA
Muntiacus reevesi genome assembly, chromosome: 3.
OZ005626.1:141023013-141023032
TTTTGTATCTATGTGCTCAGTTTTTTTGTT141023013TGGGAGTGTTTTTGCTGTTGTTGTTTTTTTTTAATTCCACATACAAGTTA
Echiichthys vipera genome assembly, chromosome: 9.
OY829654.1:24975472-24975491
AGAGATCCTAATGGCCCTATGGTGTCATCT24975472TGGGAGTGTTTTTGCTGTTGTCATTGTGGAGGCGTGTCTCTGACCTGTGC
Dianthus caryophyllus mRNA, clone: CES09E24, 5' end sequence.
FY385622.1:492-511
TCTTGTAATTTTGTTTTGTAATTTGTGAAT492TGGGAGTGTTTTTGCTGTTGTTTTGTGTTCAATGTTTGGATGGATGGATT
1093015513588 Global-Ocean-Sampling_GS-35-01-01-1P5KB marine metagenome genomic clone 1061002428023 5', genomic survey sequence.
ER515854.1:505-524
GTCTTCTATGAAGACGGTTGCTATTGTTGT505TGGGAGTGTTTTTGCTGTTGCTCATGTAGGTTTGCTTGGGTATCTGGTAC
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0002889.
LN002912.1:3150-3169
TTATGAAAGGAAATTGATATTAGTGCTGTC3150TGGGAGTGTTTTTGCTGTTGACGGGAGTTGCGCCATCCGTGAGTGGCCAT
Eustalomyia histrio genome assembly, chromosome: 1.
OX456523.1:23508522-23508541
GTTGTTGTTCGTTGTATGGTTAAATAAATA23508522TGGGAGTGTTTTTGCTGTTGTTGTTCACAATAACTAAATAGACAGACAAT
Sturmia bella genome assembly, chromosome: 1.
OY759168.1:116791593-116791612
TCGATGGTGTTGGGATCGGTGAAGGGCTGC116791593TGGGAGTGTTTTTGCTGTTGCTGCTGTAATTGCTGTTGAGCCGCCTGATG
Eudasyphora cyanicolor genome assembly, chromosome: 1.
OZ005734.1:94953082-94953101
TCGATTGTGTTGGGATCGGTGAAGGGTTGT94953082TGGGAGTGTTTTTGCTGTTGCAAATGTTGCTGGGCCGCCTGGTGTTGGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAACAGCAAAAACACTCCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACAGCAAAAACACTCCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.219 | 0.210 | search_plus_done; http://172.18.8.135:50400/match?q=CAACAGCAAAAACACTCCCA&k=0&no_gap=0&offset=0&limit=50
0.371 | 0.152 | search_minus_done; http://172.18.8.135:50400/match?q=TGGGAGTGTTTTTGCTGTTG&k=0&no_gap=0&offset=0&limit=43
0.377 | 0.005 | cgi_end;

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