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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 12:45:09, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KBrH020E15R KBrH, Brassica rapa HindIII BAC library Brassica rapa subsp. pekinensis genomic clone KBrH020E15, genomic survey sequence.
DX892002.1:66-85
GGAGAACGAGTTCAGGAGGCTTTTACAGGA66CAACAGTGTTCCACTTCCTATGGCGTCTCCGTCTTCTTTAGGAGAGCAGC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB010F06, complete sequence.
AC189217.2:91238-91257
GGAGAACGAGTTCAGGAGGCTGTTACAGGA91238CAACAGTGTTCCACTTCCTATGGCGTCTCCGTCTTCTTTAGGAGAGCAGC
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:3065756-3065775
GGAGAACGAGTTCAGGAGGCTGTTACAGGA3065756CAACAGTGTTCCACTTCCTATGGCGTCTCCTTCTTCGTTGGGAGAGCAGC
Brassica napus cultivar Xiang5A chromosome 1.
CP151896.1:3065756-3065775
GGAGAACGAGTTCAGGAGGCTGTTACAGGA3065756CAACAGTGTTCCACTTCCTATGGCGTCTCCTTCTTCGTTGGGAGAGCAGC
Brassica rapa genome, scaffold: A01.
LR031571.1:2988515-2988534
GGAGAACGAGTTCAGGAGGCTGTTACAGGA2988515CAACAGTGTTCCACTTCCTATGGCGTCTCCGTCTTCTTTAGGAGAGCAGC
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:2989233-2989252
GGAGAACGAGTTCAGGAGGCTGTTACAGGA2989233CAACAGTGTTCCACTTCCTATGGCGTCTCCGTCTTCTTTAGGAGAGCAGC
Brassica rapa subsp. trilocularis genome assembly, chromosome: 1.
OZ282415.1:3058509-3058528
GGAGAACGAGTTCAGGAGGCTGTTACAGGA3058509CAACAGTGTTCCACTTCCTATGGCGTCTCCTTCTTCGTTGGGAGAGCAGC
Brassica rapa subsp. narinosa genome assembly, chromosome: 1.
OZ282442.1:2989304-2989323
GGAGAACGAGTTCAGGAGGCTGTTACAGGA2989304CAACAGTGTTCCACTTCCTATGGCGTCTCCGTCTTCTTTAGGAGAGCAGC
Miltochrista miniata genome assembly, chromosome: 13.
OW121760.1:22974131-22974150
CAAAAGCAGAATCATTTGTTATGCTGTATT22974131CAACAGTGTTCCACTTCCTAAACATTCTTTTATTAAATTATGAGAATCGC
Scaphidium quadrimaculatum genome assembly, chromosome: 5.
OZ259509.1:82339134-82339153
CGCTTTTCTTATCTATTTACATAATTATCG82339134CAACAGTGTTCCACTTCCTAAAGCAGCACTGCAGAGCTTCTTTGGAAATA
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_19135.
FX713047.1:273-292
GCTGCTCTCCTAAAGAAGACGGAGACGCCA273TAGGAAGTGGAACACTGTTGTCCTGTAACAGCCTCCTGAACTCGTTCTCC
Agapeta zoegana genome assembly, chromosome: 7.
OZ076831.1:25071504-25071523
GCTTTTAAGGCAATGCCAAGTTGCCTTCGA25071504TAGGAAGTGGAACACTGTTGTGAATGTGATTCGCAAGTCATGATACCACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAACAGTGTTCCACTTCCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACAGTGTTCCACTTCCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.490 | 0.481 | search_plus_done; http://172.18.8.135:50900/match?q=CAACAGTGTTCCACTTCCTA&k=0&no_gap=0&offset=0&limit=50
0.815 | 0.325 | search_minus_done; http://172.18.8.135:50900/match?q=TAGGAAGTGGAACACTGTTG&k=0&no_gap=0&offset=0&limit=40
0.817 | 0.002 | cgi_end;

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