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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 07:27:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:4816842-4816861
TGAAAATCCACACGTATATTAAACTCATGC4816842CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGTACCTTGAT
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:4957325-4957344
TGAAAATCCTCATGTATATCAAATTCATTC4957325CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACATACCTTGAT
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:5080076-5080095
TGAAAATCCACACGTATATTAAACTCATGC5080076CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGTACCTTGAT
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:5331300-5331319
TGAAAATCCTCATGTATATCAAATTCATTC5331300CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:5094182-5094201
TGAAAATCCTCATGTATATCAAATTCATTC5094182CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:37886468-37886487
TGAAAATCCACACGTATATTAAACTCATGC37886468CAACCAACAGCTCTGCAATCAAACTGAAGAACCCAAATACGTACCTTGAT
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:5709389-5709408
TGAAAATCCTCATGTATATCAAATTCATTC5709389CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:5153741-5153760
TGAAAATCCACACGTATATTAAACTCATGC5153741CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGCACCTTGAT
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:5460672-5460691
TGAAAATCCTCATGTATATCAAATTCATTC5460672CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:4909629-4909648
TGAAAATCCACACGTATATTAAACTCATGC4909629CAACCAACAGCTCTGCAATCAAACCGAAGAACCCAAATACATACCTTGAT
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143390.1:4990298-4990317
TGAAAATCCTCATGTATATCAAATTCATTC4990298CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACATACCTTGAT
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:5073622-5073641
TGAAAATCCACACGTATATTAAACTCATGC5073622CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGTACCTTGAT
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:5121300-5121319
TGAAAATCCTCATGTATATCAAATTCATTC5121300CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus domestica genome assembly, chromosome: 13.
OU696689.1:5206911-5206930
TGAAAATCCACACGTTTATTAAACTCATGC5206911CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGCACCTTGAT
Malus domestica genome assembly, chromosome: 16.
OU696692.1:5511462-5511481
TGAAAATCCTCATGTATATCAAATTCATTC5511462CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus domestica genome assembly, chromosome: 13.
OU744554.1:5090757-5090776
TGAAAATCCACACGTTTATTAAACTCATGC5090757CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGCACCTTGAT
Malus domestica genome assembly, chromosome: 16.
OU744557.1:5530967-5530986
TGAAAATCCTCATGTATATCAAATTCATTC5530967CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus domestica genome assembly, chromosome: 13.
OU744965.1:5087754-5087773
TGAAAATCCACACGTTTATTAAACTCATGC5087754CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGCACCTTGAT
Malus domestica genome assembly, chromosome: 16.
OU744968.1:5454595-5454614
TGAAAATCCTCATGTATATCAAATTCATTC5454595CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus domestica genome assembly, chromosome: 13.
OU745003.1:4953397-4953416
TGAAAATCCACACGTACATTAAACTCATGC4953397CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGCACCTTGAT
Malus domestica genome assembly, chromosome: 16.
OU745006.1:5524888-5524907
TGAAAATCCTCATGTATATCAAATTCATTC5524888CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus x robusta genome assembly, chromosome: 3.
OY720327.1:5753546-5753565
TGAAAATCCTCATGTATATCAAATTCATTC5753546CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAATTACATACCTTGAT
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:5105094-5105113
TGAAAATCCACACGTATATTAAACTCATGC5105094CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACGCACCTTGAT
Crataegus laevigata genome assembly, chromosome: 3.
OY756940.1:5387187-5387206
TATATATATATATATATATCAAATTCATGC5387187CAACCAACAGCTCTGCAATCAAACTGAAGAACCCAAATACATACCTTGAT
Crataegus laevigata genome assembly, chromosome: 11.
OY756948.1:5481813-5481832
TGAAAATCCACATGTACATCAAATTCATTC5481813CAACCAACAGCTCTGCAATCAAACTTAAGAACCTAAATACCTACCTTGAT
Pyrus communis genome assembly, chromosome: 4.
OY757071.1:4448734-4448753
TGAAAATCCTCATGTATATCAAATTCATTC4448734CAACCAACAGCTCTGCAATCAAACTTAAGAACCCAAATACATACCTTGAT
Zootoca vivipara genome assembly, chromosome: 12.
OY735913.1:13453330-13453349
TCATAGCCAATGATTTGCTACTTACTCTCG13453330GATTGCAGAGCTGTTGGTTGGGGTGTGATGACCAATGGCCAACTGTGGCT
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:35883793-35883812
ATCAAGGTACGTATTTGGGTTCTTCAGTTT35883793GATTGCAGAGCTGTTGGTTGGCATGAGTTTAATATACGTGTGGATTTTCA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:25393267-25393286
ATCAAGGTATGTATTTGGGTTCTTCAGTTT25393267GATTGCAGAGCTGTTGGTTGGCATAAGTTTGATACAGATGTGGATTTTCA
Marinomonas sp. CT5 chromosome.
CP025572.1:749374-749393
TCAGAGTCAAAACAGCGATAAAAATACACA749374GATTGCAGAGCTGTTGGTTGATCTCACAGTAGAGCAAACGGATTGGGGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAACCAACAGCTCTGCAATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACCAACAGCTCTGCAATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.110 | search_plus_done; http://172.18.8.135:50400/match?q=CAACCAACAGCTCTGCAATC&k=0&no_gap=0&offset=0&limit=50
0.175 | 0.057 | search_minus_done; http://172.18.8.135:50400/match?q=GATTGCAGAGCTGTTGGTTG&k=0&no_gap=0&offset=0&limit=24
0.178 | 0.003 | cgi_end;

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