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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-04 12:25:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

000919AALA005308HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA005308, mRNA sequence.
CN863645.1:247-267
AATTGTTGTCACGGTGAATGGAGAGATTTA247CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
000919AALA005309HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA005309, mRNA sequence.
CN863646.1:247-267
AATTGTTGTCACGGTGAATGGAGAGATTTA247CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
010417AASA003126HT (AASA) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASA003126, mRNA sequence.
CN880192.1:438-458
AATTGTTGTCACGGTGAATGGAGAGATTTA438CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
010813AASB001323HT (AASB) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASB001323, mRNA sequence.
CN882812.1:459-479
AATTGTTGTCACGGTGAATGGAGAGATTTA459CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
010512AAWA002029HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA002029, mRNA sequence.
CN887414.1:125-145
AATTGTTGTCACGGTGAATGGAGAGATTTA125CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
010512AAWA002045HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA002045, mRNA sequence.
CN887423.1:125-145
AATTGTTGTCACGGTGAATGGAGAGATTTA125CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
010604AAWA004215HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA004215, mRNA sequence.
CN888551.1:125-145
AATTGTTGTCACGGTGAATGGAGAGATTTA125CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Mdfw2065b10.y4 Mdfw Malus domestica cDNA clone Mdfw2065b10 5', mRNA sequence.
CO416408.1:36-56
ACTCACTAAATAGGTGAATGGAGAGATTTA36CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAGGGTCTC
3_A03_C133_1 malus abscission express library Malus domestica cDNA, mRNA sequence.
DY241993.1:230-250
AATTGTTGTCACGGTGAATGGAGAGATTTA230CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
3_D11_P169_3 malus abscission express library Malus domestica cDNA, mRNA sequence.
DY242026.1:230-250
AATTGTTGTCACGGTGAATGGAGAGATTTA230CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
011023ABEA002353HT (ABEA) Royal Gala seedling leaves infected with Venturia inaequalis Malus domestica cDNA clone ABEA002353, mRNA sequence.
EB148805.1:440-460
AATTGTTGTCACGGTGAATGGAGAGATTTA440CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
fl_06B10_CF10 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD255017.1:122-142
AATTGTTGTCACGGTGAATGGAGAGATTTA122CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Mdfrjg3504A24.g1 Apple_EST_Mdfrjg Malus domestica cDNA 5' similar to gb|AAO38524.1| asparagine synthetase [Securigera parviflora], mRNA sequence.
GO540903.1:196-216
AATTGTTGTCACGGTGAATGGAGAGATTTA196CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Mdfwj2080L07.g1 Apple_EST_Mdfwj Malus domestica cDNA 5' similar to gb|AAO38524.1| asparagine synthetase [Securigera parviflora], mRNA sequence.
GO543075.1:306-326
AATTGTTGTCACGGTGAATGGAGAGATTTA306CAACCATGAAGAGCTGAGGAGCGGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus pyrifolia mRNA, clone: NFR3_03_27, 5' end sequence, expressed in fruit.
HX751340.1:416-436
AATTGTTGTCACGGTGAATGGAGAGATTTA416CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus pyrifolia mRNA, clone: NFR3_04_02, 5' end sequence, expressed in fruit.
HX751407.1:418-438
AATTGTTGTCACGGTGAATGGAGAGATTTA418CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus pyrifolia mRNA, clone: NFR3_10_41, 5' end sequence, expressed in fruit.
HX751973.1:417-437
AATTGTTGTCACGGTGAATGGAGAGATTTA417CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus pyrifolia mRNA, clone: NFR3_24_47, 5' end sequence, expressed in fruit.
HX753195.1:415-435
AATTGTTGTCACGGTGAATGGAGAGATTTA415CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus pyrifolia mRNA, clone: NFR3_29_30, 5' end sequence, expressed in fruit.
HX753634.1:416-436
AATTGTTGTCACGGTGAATGGAGAGATTTA416CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus pyrifolia mRNA, clone: NFR4_13_11, 5' end sequence, expressed in fruit.
HX754725.1:1-21
1CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
TSA: Pyrus pyrifolia mRNA, contig: contig_2383.
FX395968.1:176-196
AATTGTTGTCACGGTGAATGGAGAGATTTA176CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus pyrifolia strain Whangkeumbae asparagine synthetase (AS) mRNA, complete cds.
AF195231.1:122-142
AATTGTTGTCACGGTGAATGGAGAGATTTA122CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141912.1:4966862-4966882
TTTTAAATCATAGGTGAATGGAGAGATTTA4966862CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141929.1:5367219-5367239
TTTAAAATCATAGGTGAATGGAGAGATTTA5367219CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:28149032-28149052
GAAAATCATTAAGGTGAATGGAAAGATTTA28149032CAACCATGAAGAGCTGAGGAGCCATTTGCCAAATCAGATTTATAAGGTCTC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:28291353-28291373
GAAAATCATTAAGGTGAATGGAAAGATTTA28291353CAACCATGAAGAGCTGAGGAGCCATTTGCCAAATCAGATTTATAAGGTCTC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:28513027-28513047
GAAAATCATGAAGGTGAATGGAGAGATTTA28513027CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:28600687-28600707
GAAAATCATGAAGGTGAATGGAGAGATTTA28600687CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143360.1:5081938-5081958
TTTAAAATCATAGGTGAATGGAGAGATTTA5081938CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:29558345-29558365
GAAAATCATGAAGGTGAATGGAGAGATTTA29558345CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:4655868-4655888
TTTTAAATCATAGGTGAATGGAGAGATTTA4655868CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:30546998-30547018
GAAAATCATTAAGGTGAATGGAGAGATTTA30546998CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:30635103-30635123
GAAAATCATGAAGGTGAATGGAGAGATTTA30635103CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus sylvestris genome assembly, chromosome: 3.
OU696505.1:5384176-5384196
TTTAAAATCATAGGTGAATGGAGAGATTTA5384176CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus domestica genome assembly, chromosome: 2.
OU696678.1:30259383-30259403
GAAAATCATTAAGGTGAATGGAGAGATTTA30259383CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus domestica genome assembly, chromosome: 2.
OU696678.1:30347467-30347487
GAAAATCATGAAGGTGAATGGAGAGATTTA30347467CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus domestica genome assembly, chromosome: 3.
OU696679.1:5266969-5266989
TTTAAAATCATAGGTGAATGGAGAGATTTA5266969CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus domestica genome assembly, chromosome: 3.
OU744544.1:5266164-5266184
TTTAAAATCATAGGTGAATGGAGAGATTTA5266164CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus domestica genome assembly, chromosome: 2.
OU744954.1:30015616-30015636
GAAAATCATTAAGGTGAATGGAGAGATTTA30015616CAACCATGAAGAGCTGAGGAGCCATTTGCCAAATCAGATTTATAAGGTCTC
Malus domestica genome assembly, chromosome: 2.
OU744954.1:30126911-30126931
GAAAATCATTAAGGTGAATGGAGAGATTTA30126911CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTC
Malus domestica genome assembly, chromosome: 3.
OU744955.1:5224384-5224404
TTTAAAATCATAGGTGAATGGAGAGATTTA5224384CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus domestica genome assembly, chromosome: 3.
OU744993.1:5306533-5306553
TTTAAAATCATAGGTGAATGGAGAGATTTA5306533CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:4932020-4932040
TTTTAAATCATAGGTGAACGGAGAGATTTA4932020CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:22055948-22055968
TGAAAATCATTAGGTGAATGGAGAGATTTA22055948CAACCATGAAGAGCTGAGGAGCCGTTTGCCAAATCAGATTTATAAGGTCTG
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:4464602-4464622
TTTTAAATCATAGGTGAATGGAGAGATTTA4464602CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:4470366-4470386
TTTTAAATCATAGGTGAATGGAGAGATTTA4470366CAACCATGAAGAGCTGAGGAGCCGTCTGCCGAATCACAAGTTCCGAACCGG
Scyliorhinus canicula genome assembly, chromosome: 10.
LR744039.1:174795373-174795393
TCCGCACCCAAGCTCTGGTGAAAAGAATTA174795373CTCCTCAGCTCTTCATGGTTGCTCATCGTTGCTTCTATAATCTCGATCATT
TSA: Pyrus x bretschneideri Unigene40866_XinShao mRNA sequence.
JR632533.1:893-913
CCGGTTCGGAACTTGTGATTCGGCAGACGG893CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTAACCGTGACAACAATT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141955.1:32073455-32073475
CCGGTTCGGAACTTGTGATTCGGCAGACGG32073455CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTCACCTATGATTTAAAA
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141972.1:33013745-33013765
CCGGTTCGGAACTTGTGATTCGGCAGACGG33013745CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTCACCTATGATTTAAAA
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:7242592-7242612
GAGACCTTATAAATCTGATTTGGCAAATGG7242592CTCCTCAGCTCTTCATGGTTGTAAATCTTTCCATTCACCTTAATGATTTTC
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:7335285-7335305
GAGACCTTATAAATCTGATTTGGCAAACGG7335285CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTCACCTTAATGATTTTC
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:8405747-8405767
CAGACCTTATAAATCTGAATTGGCAAACAG8405747CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTCACCTAATGATTTTCA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:8494137-8494157
CAGACCTTATAAATCTGAATTGGCAAACGG8494137CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTCACCTAATGATTTTCA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:8631615-8631635
AAAAACGATAAAGAAGGTCATTGGGAATGG8631615CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTCACCTTAATGATTTTC
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:8761283-8761303
CAGACCTAATAAATCTGAATTGGCAAACGG8761283CTCCTCAGCTCTTCATGGTTGTAAATCTCTCCATTCACCTAATGATTTTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAACCATGAAGAGCTGAGGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACCATGAAGAGCTGAGGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.519 | 1.511 | search_plus_done; http://172.18.8.135:50400/match?q=CAACCATGAAGAGCTGAGGAG&k=0&no_gap=0&offset=0&limit=50
1.670 | 0.151 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCTCAGCTCTTCATGGTTG&k=0&no_gap=0&offset=0&limit=4
1.677 | 0.006 | cgi_end;

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