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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 11:30:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus communis genome assembly, chromosome: 12.
OY757079.1:25062584-25062603
CCCATTGGTGGCGAGACTGCGCGTTCAGGC25062584CAACGACAGTTCGAATAGGATGGCGGTGGATGGTGATCAGCAGCCATACG
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH011_02222m, 5' end sequence.
AB450698.1:161-180
CGTATGGCTGCTGATCACCATCCACCGCCA161TCCTATTCGAACTGTCGTTGGCCTGAACGCGCAGTCTCGCCACCAATGGG
Pyrus pyrifolia mRNA, clone: NFR1_02_22, 5' end sequence, expressed in fruit.
HX745809.1:102-121
CGTATGGCTGCTGATCACCATCCACCGCCA102TCCTATTCGAACTGTCGTTGGCCTGAACGCGCAGTCTCGCCACCAATGGG
TSA: Pyrus pyrifolia mRNA, contig: contig_2266revcomp.
FX433569.1:115-134
CGTATGGCTGCTGATCACCATCCACCGCCA115TCCTATTCGAACTGTCGTTGGCCTGAACGCGCAGTCTCGCCACCAATGGG
TSA: Pyrus x bretschneideri Unigene83972_XinShao mRNA sequence.
JR668170.1:122-141
CGTATGGCTGCTGATCACCATCCACCGCCA122TCCTATTCGAACTGTCGTTGGCCTGAACGCGCAGTCTCGCCACCAATGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAACGACAGTTCGAATAGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACGACAGTTCGAATAGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.326 | 0.317 | search_plus_done; http://172.18.8.135:50400/match?q=CAACGACAGTTCGAATAGGA&k=0&no_gap=0&offset=0&limit=50
0.536 | 0.211 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTATTCGAACTGTCGTTG&k=0&no_gap=0&offset=0&limit=49
0.539 | 0.003 | cgi_end;

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