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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:53:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Coregonus sp. 'balchen' genome assembly, chromosome: 31.
LR778283.1:13095227-13095246
CTGCTAAAATGTTTTCAGGATTTCCCCTAG13095227CAACGAGGAGGGAGAGAAGAAAGAAGGGAATATTAGAGAGATGTGAAAGG
Pleuronectes platessa genome assembly, chromosome: 1.
OX374648.1:17603670-17603689
TCCCGCTGATGATGACGATGATGAGAAGAA17603670CAACGAGGAGGGAGAGAAGAAGGAGGAGCAAGAGGAAGCAGGGGAGGCGG
Lipophrys pholis genome assembly, chromosome: 8.
OY726540.1:29186191-29186210
CGGCACAACGCGCATGGCTTTCCTGCCGGC29186191CAACGAGGAGGGAGAGAAGATCCTGAAGCTGCTGAGGAAAGCCTTCGACA
Blennius ocellaris genome assembly, chromosome: 5.
OY730205.1:28858861-28858880
CGGCACCACGCGCATTGCCTTCCTGCCGGC28858861CAACGAGGAGGGAGAGAAGATCCTGAAGCTGCTGAGGAAGGCCTTCGACC
Blennius ocellaris genome assembly, chromosome: 14.
OY730214.1:20243340-20243359
CCTTTCAGGCAATAAAAAAGTGAACGTCGG20243340CAACGAGGAGGGAGAGAAGAATCTGCATCTGTCTGATATCGTTGGCATGT
3_H06_C182_2 malus abscission express library Malus domestica cDNA, mRNA sequence.
DY242058.1:72-91
GCTTGACTTTGCCGTCAGCAGAGAGCAAAC72CAACGAGGAGGGAGAGAAGATGTACATCCAAACCAGAATGGCTCAGTATG
Elaeis guineensis EST, clone (6lib)_isotig36943.
LM632586.1:498-517
CGCCGCTGGAGTGGGCGGCTGTGGCGGCGG498CAACGAGGAGGGAGAGAAGAAGGAAGGCAAGTCCCGCCAGTCTCGCCATG
Bb0224D13_f p226/135/16 Lolium perenne genomic, genomic survey sequence.
MJ367700.1:204-223
TCCTCGTCAACGCCATGGTGATATCGCCGC204CAACGAGGAGGGAGAGAAGACATAAAACATTATTCTTATTGTACACATCG
Spongilla lacustris genome assembly, chromosome: 13.
OX442427.1:600634-600653
TTCTGTAAATGGAATGGCGAATGTAACAGG600634CAACGAGGAGGGAGAGAAGAGGCAACAACTTATGCAGCATGTGGAGATTT
Sylvilagus floridanus genome assembly, chromosome: 11.
OX463233.1:179132536-179132555
TTTATTGTCTTCCTTCTGGTCTTACTGCCA179132536TCTTCTCTCCCTCCTCGTTGCTCTCCGCACGTTTTCTTGCAGTAGGTTCC
Salarias fasciatus genome assembly, chromosome: 20.
LR597455.1:25127622-25127641
TGTCGAAGGCTTTCCTCAGCAGCTTCAGGA25127622TCTTCTCTCCCTCCTCGTTGCCCGGCAGGAAAGCGATGCGCGTGGTGCCG
Platichthys flesus genome assembly, chromosome: 1.
OX438716.1:15139282-15139301
CCGCCTCCCCTGCTTCCTCTTGCTCCTCCT15139282TCTTCTCTCCCTCCTCGTTGTTCTTCTCATCATCATCATCATCAGCGGGA
EG-A11_010_G12 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN600400.1:177-196
CATGGCGAGACTGGCGGGACTTGCCTTCCT177TCTTCTCTCCCTCCTCGTTGCCGCCGCCACANNNGCCCACTCCAGCGGCG
TSA: Elaeis guineensis isotig04184.Elguifruit mRNA sequence.
JO091438.1:84-103
CATGGCGAGACTGGCGGGACTTGCCTTCCT84TCTTCTCTCCCTCCTCGTTGCCGCCGCCACAGCCGCCCACTCCGGTGGTG
Nomada fabriciana genome assembly, chromosome: 5.
OU015692.1:19116934-19116953
GCCCGTATTCGCCAAGGCCTCCACGAAATC19116934TCTTCTCTCCCTCCTCGTTGCCTTTTGACCCTACCTCTCTCCCGTGGCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAACGAGGAGGGAGAGAAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACGAGGAGGGAGAGAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.343 | 0.335 | search_plus_done; http://172.18.8.135:50400/match?q=CAACGAGGAGGGAGAGAAGA&k=0&no_gap=0&offset=0&limit=50
0.512 | 0.169 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTCTCTCCCTCCTCGTTG&k=0&no_gap=0&offset=0&limit=41
0.516 | 0.004 | cgi_end;

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