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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:09:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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44-E013414-021-002-B02q-SP6r ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022B022Q, mRNA sequence.
CX192332.1:218-237
TGTTTAATTAGACAGGAACTCTGTGTAGGA218CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAGGACACCCCAC
EX20LIB6_UP_009_D06_19FEB2004_042 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES971253.1:172-191
TTTCTGTTTAGACAGGAACGCTGTGTAGGA172CAACTGTCTCCACGGTGAGACCTGG
EX20LIB6_UP_011_A08_19FEB2004_064 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES971300.1:172-191
TTTCTGTTTAGACAGGAACGCTGTGTAGGA172CAACTGTCTCCACGGTGAGACCTGG
EX20LIB6_UP_012_G01_17MAR2004_003 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES971348.1:167-186
TTTCTGTTTAGACAGGAACGCTGTGTAGGA167CAACTGTCTCCACGGTGAGACCTGG
EX20LIB6_UP_074_C12_20MAY2004_092 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES973095.1:170-189
TTTCTGTTTAGACAGGAACGCTGTGTAGGA170CAACTGTCTCCACGGTGAGACCTGG
EX20LIB6_UP_081_A11_01JUL2004_095 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES973279.1:173-192
TTTCTGTTTAAACAGGAACGCTGTGTAGGA173CAACTGTCTCCACGGTGAGACCTGG
EX20LIB6_UP_146_B07_31OCT2004_061 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES974966.1:172-191
TTTCTGTTTAGACAGGAACGCTGTGTAGGA172CAACTGTCTCCACGGTGAGACCTGG
0102154 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV201001.1:156-175
TGTTTAATTAAACAGGAACGCTGTGTAGGA156CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAGGACACCCCAC
RR3AY05JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EV545904.1:179-198
TTTCTGTTTAAACAGGAACGCTGTGTAGGA179CAACTGTCTCCACGGTGAGACCCGGTCCGAAACCAAACAAAACACCCCAC
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF12F10, 3'-end sequence.
FY072358.1:148-167
TTTCTGTTTAGACAGGAACGCTGTGTAGGA148CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
0232234 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO927595.1:130-149
TTTCTGTTTAGACAGGAACGCTGTGTAGGA130CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAATAAGACACCCCAT
0271374 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO937380.1:225-244
TTTCTGTTTAGACAGGAACGCTGTGTAGGA225CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
0231479 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO939968.1:305-324
TTTCTGTTTAAACAGGAACGCTGTGTAGGA305CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
0231495 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO939972.1:305-324
TTTCTGTTTAAACAGGAACGCTGTGTAGGA305CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
0231691 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO940021.1:305-324
TTTCTGTTTAAACAGGAACGCTGTGTAGGA305CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_22044.
FX699688.1:89-108
TTTCTGTTTAGACAGGAACGCTGTGTAGGA89CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_33990.
FX745976.1:142-161
TTTCTGTTTAGACAGGAACGCTGTGTAGGA142CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
TSA: Raphanus sativus RS24372 mRNA sequence.
JT808919.1:142-161
TTTCTGTTTAAACAGGAACGCTGTGTAGGA142CAACTGTCTCCACGGTGAGACCCGGTCCGAAACCAAACAAGACACCCCAC
TSA: Cunninghamia lanceolata Unigene3330_C.lanceolata mRNA sequence.
JV012200.1:198-217
GTCTTTACTACAGGGCAACGCTCTTGAGAA198CAACTGTCTCCACGGTGAGACC
BOOAS89TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BOOAS89, genomic survey sequence.
BZ484078.1:361-380
TGTTTAATTAGACAGGAACGCTGTGTAGGA361CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAGGACACCCCAC
KBrH010A19F KBrH, Brassica rapa HindIII BAC library Brassica rapa subsp. pekinensis genomic clone KBrH010A19, genomic survey sequence.
CW984364.1:531-550
TTTCTGTTTAGACAGGAACGCTGTGTAGGA531CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAAGACACCCCAT
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:64777684-64777703
TGTTTAATTAGACAGGAACGCTGTGTAGGA64777684CAACTGTCTCCACGGTGAGACCTGGTCCGAACCCAAACAGGACACCCCAC
Raphanus sativus genome assembly, chromosome: 5.
LR778314.1:11502144-11502163
TTTCTGTTTAAACAGGAACGCTGTGTAGGA11502144CAACTGTCTCCACGGTGAGACCCGGTCCGAAACCAAACAAGACACCCCAC
Capricornis sumatraensis isolate serow.1 chromosome 5.
CP135631.1:121680807-121680826
GCTCTCCCACGGCCGTGACTCGCGCGATGC121680807TCTCACCGTGGAGACAGTTGTGTGTCCGAGTATGGGGGTCGTCAGCACCC
Sequence 33 from patent US 7268276.
EA289035.1:1250-1269
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG1250TCTCACCGTGGAGACAGTTGTCTTGCACAGCGTTCCTCTCTAAACAGAAA
Sequence 150 from patent US 7268276.
EA289149.1:1247-1266
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG1247TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
BN40.044K04F011221 BN40 Brassica napus cDNA clone BN40044K04, mRNA sequence.
CD830189.1:638-657
GTGGGGTGTCCTGTTTGGGGTCGGACCAGG638TCTCACCGTGGAGACAGTTGTCCTACACA
44-E013336-021-002-B02q-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022B022Q, mRNA sequence.
CX192331.1:326-345
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG326TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
01-E010532-021-002-B02-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022B022Q, mRNA sequence.
CX196200.1:325-344
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG325TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
Brassica oleracea var. viridis mRNA, clone: KALE-063C14, 3' end sequence.
DK539290.1:640-659
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG640TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
Brassica oleracea var. viridis mRNA, clone: KALE-063O04, 3' end sequence.
DK539566.1:594-613
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG594TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
Brassica oleracea var. viridis mRNA, clone: KALE-067L23, 3' end sequence.
DK541042.1:556-575
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG556TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
Brassica oleracea var. viridis mRNA, clone: KALE-093I11, 3' end sequence.
DK550899.1:663-682
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG663TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTTTAAACAGAAA
Brassica oleracea var. viridis mRNA, clone: KALE-098M16, 3' end sequence.
DK552913.1:611-630
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG611TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
35ETGS60_UP_016_D07_12FEB2005_057 Brassica napus 35ETGS60 Brassica napus cDNA 5', mRNA sequence.
EE432525.1:290-309
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG290TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
BNSCS4CT_UP_020_B12_18JAN2005_094 Brassica napus seed coat BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EE469206.1:462-481
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG462TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
BNSCS4CT_UP_028_E11_21JAN2005_087 Brassica napus seed coat BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EE469791.1:502-521
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG502TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
BNSCS5CT_UP_023_F12_21JAN2005_086 Brassica napus seed coat BNSCS5CT Brassica napus cDNA 5', mRNA sequence.
EE472341.1:580-599
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG580TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
36RDBRG_UP_019_B10_12JUN2004_078 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence.
EE517707.1:558-577
ATGGGGTGTCCTGTTTGGTTTCGGACCAGG558TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
EX20LIB6_UP_023_D12_18MAR2004_090 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES971619.1:6-25
CCAGG6TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
EX20LIB6_UP_034_H05_24MAR2004_033 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES971934.1:6-25
CCAGG6TCTCACCGTGGAGACAGTTGTCCTACCCCGCGTTCCTGTCTAAACAGAAA
EX20LIB6_UP_062_C02_30APR2004_012 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES972739.1:6-25
CCAGG6TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACGGAAA
EX20LIB6_UP_070_D03_11MAY2004_025 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES972989.1:6-25
CCAGG6TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
EX20LIB6_UP_075_H12_20MAY2004_082 Brassica napus EX20LIB6 Brassica napus cDNA 5', mRNA sequence.
ES973138.1:6-25
CCAGG6TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
BNSCS2CT_UP_173_B03_27APR2007_029 Brassica napus BNSCS2CT Brassica napus cDNA 5', mRNA sequence.
EV028417.1:670-689
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG670TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
BNSCS2CT_UP_284_C07_25MAY2007_059 Brassica napus BNSCS2CT Brassica napus cDNA 5', mRNA sequence.
EV036385.1:349-368
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG349TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
BNSCS2CT_UP_322_A11_28MAY2007_095 Brassica napus BNSCS2CT Brassica napus cDNA 5', mRNA sequence.
EV039110.1:366-385
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG366TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
BNSCS3CT_UP_093_D11_05MAY2007_089 Brassica napus BNSCS3CT Brassica napus cDNA 5', mRNA sequence.
EV043897.1:418-437
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG418TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
BNSCS4CT_UP_077_A12_18MAY2007_096 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EV064226.1:443-462
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG443TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
BNSCS4CT_UP_088_E04_18MAY2007_024 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EV065150.1:183-202
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG183TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
BNSCS4CT_UP_106_C12_18MAY2007_092 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EV066548.1:125-144
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG125TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
BNSCS4CT_UP_121_H07_20MAY2007_049 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EV067773.1:349-368
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG349TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
BNSCS4CT_UP_135_C05_20MAY2007_043 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EV068806.1:673-692
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG673TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
TSA: Raphanus sativus var. sativus RNA, contig: WG3_258.
FX659045.1:1239-1258
GTGGGGTGTCTTGTTTGGTTTCGGACCGGG1239TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTTTAAACAGAAA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_28934.
FX750471.1:672-691
GTGGGGTGTCTTGTTTGGTTTCGGACCGGG672TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTTTAAACAGAAA
Raphanus sativus cultivar WK10039 clone RsH008N23, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC255232.1:158103-158122
GTGGGGTGTCTTGTTTGGTTTCGGACCGGG158103TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTTTAAACAGAAA
Brassica napus chalcone synthase B1 (CHSB1) mRNA, complete cds.
AF076335.1:1217-1236
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG1217TCTCACCGTGGAGACAGTTGTCTTGCACAGCGTTCCTCTCTAA
Brassica napus chalcone synthase B2 (CHSB2) mRNA, partial cds.
AF076336.1:1220-1239
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG1220TCTCACCGTGGAGACAGTTGTCTTGCACAGCGTTCCTCTCTA
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:2632382-2632401
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG2632382TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
Brassica rapa subsp. rapa cultivar Tsuda chalcone synthase 5 protein (CHS5) mRNA, partial cds.
GU966528.1:666-685
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG666TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
Brassica napus genome assembly, chromosome: A02.
HG994356.1:2453685-2453704
ATGGGGTGTCTTGTTTGGGTTCGGACCAGG2453685TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
Brassica napus genome assembly, chromosome: C02.
HG994366.1:3520867-3520886
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG3520867TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAATTAAACA
Raphanus sativus RsCHS mRNA for chalcone synthase, partial cds.
LC202030.1:1037-1056
GTGGGGTGTCTTGTTTGGTTTCGGACCGGG1037TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTTTAAACAGAAA
Brassica rapa genome, scaffold: A02.
LR031573.1:2469642-2469661
ATGGGGTGTCCTGTTTGGTTTCGGACCAGG2469642TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:3571295-3571314
GTGGGGTGTCCTGTTTGGGTTCGGACCAGG3571295TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:2499871-2499890
ATGGGGTGTCCTGTTTGGTTTCGGACCAGG2499871TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTCTAAACAGAAA
Raphanus sativus genome assembly, chromosome: 2.
OY743208.1:32115992-32116011
GTGGGGTGTCTTGTTTGGTTTCGGACCGGG32115992TCTCACCGTGGAGACAGTTGTCCTACACAGCGTTCCTGTTTAAACAGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAACTGTCTCCACGGTGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAACTGTCTCCACGGTGAGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.352 | 1.344 | search_plus_done; http://172.18.8.135:50400/match?q=CAACTGTCTCCACGGTGAGA&k=0&no_gap=0&offset=0&limit=50
2.844 | 1.492 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCACCGTGGAGACAGTTG&k=0&no_gap=0&offset=0&limit=27
2.874 | 0.029 | cgi_end;

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