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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-12-17 08:29:25, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Canis lupus genome assembly, chromosome: 32.
HG994414.1:28825406-28825425
TAAGATTTTATCTATTTATTTGAGAGGGAG28825406CAAGAGAGAGATCACAAGTGGGGAGGGGTAGGGGGGAGAAGCAGATTCCC
Lutra lutra genome assembly, chromosome: 3.
LR738405.1:179679578-179679597
ATTTTATTAACTTATTCAAGAGATGGTGAG179679578CAAGAGAGAGATCACAAGTGGGGTCAAAGAGTCAGAAGGACAAGCAGACT
Gulo gulo luscus COL14A1 (COL14A1) gene, complete cds.
OM350505.1:32683-32702
TTTTTTTAAGATTTTATTTATTTATTTGAC32683CAAGAGAGAGATCACAAGTGGGCAGAGAGGCAGGCAGAGAGAGAGGGGGG
Meles meles genome assembly, chromosome: 15.
OV277456.1:81063508-81063527
TTTTTAAAGGTTTTTATTTATTTATCTGTC81063508CAAGAGAGAGATCACAAGTGGGCAGAGAGACAGGTAGAGAGAGGGTGGGA
Martes martes genome assembly, chromosome: 1.
OY734063.1:156027691-156027710
TTTTTTTAAGGGTTTATTTATTTATTTGAC156027691CAAGAGAGAGATCACAAGTGGACAGAGAGGCAGGCAGACAGAGAGAGGGA
Neogale vison genome assembly, chromosome: 1.
OZ067083.1:51598478-51598497
TTTTTTTAAAGATTTTATTTATTTATTTGA51598478CAAGAGAGAGATCACAAGTGGGCAGAGAGGCAGGCAGAGAGGGGGGAAGC
Neogale vison genome assembly, chromosome: 1.
OZ067083.1:81936897-81936916
CATTTATTTATTTGAGAAAGCCATAGATAG81936897CAAGAGAGAGATCACAAGTGGGGAAGGGAGGGAGAAGCAGGCTCCCCACT
Neogale vison genome assembly, chromosome: 8.
OZ067090.1:143047359-143047378
ATTTTATTATCTTATTCAAGAGATGGTGAG143047359CAAGAGAGAGATCACAAGTGGGGTCAAAGAGTCAGAAGGACAAGCAGACT
Neogale vison genome assembly, chromosome: 1.
OZ067339.1:51102226-51102245
TTTTTTTAAAGATTTTATTTATTTATTTGA51102226CAAGAGAGAGATCACAAGTGGGCAGAGAGGCAGGCAGAGAGGGGGGAAGC
Neogale vison genome assembly, chromosome: 1.
OZ067339.1:80485167-80485186
CATTTATTTATTTGAGAAAGCCATAGATAG80485167CAAGAGAGAGATCACAAGTGGGGAAGGGAGGGAGAAGCAGGCTCCCCACT
Neogale vison genome assembly, chromosome: 8.
OZ067346.1:146478992-146479011
ATTTTATTATCTTATTCAAGAGATGGTGAG146478992CAAGAGAGAGATCACAAGTGGGGTCAAAGAGTCAGAAGGACAAGCAGACT
Martes foina genome assembly, chromosome: 3.
OZ199606.1:173919467-173919486
ATTTTATTAACTTATTCAAGAGATGGTGAG173919467CAAGAGAGAGATCACAAGTGGGGGGCAAAGAGTCAGAAGGACAAGCAGAC
Martes foina genome assembly, chromosome: 5.
OZ199608.1:81035151-81035170
TATTTATTTATTTGAGAGAGTCATAGATAG81035151CAAGAGAGAGATCACAAGTGGGGAAGGGAGGGAGAAGCAGGCTCCCCACT
Mustela nivalis genome assembly, chromosome: 14.
OZ211681.1:67924000-67924019
TTATAAATTTTATTTATTTATTTGACAGAA67924000CAAGAGAGAGATCACAAGTGGGCAGGGAGTCAGGCAGAGAGAGCGGGGGA
Mustela nivalis genome assembly, chromosome: 15.
OZ211682.1:68331036-68331055
TAAAAATTATCTTATTCAAGAGATGGTGAG68331036CAAGAGAGAGATCACAAGTGGGGTCAAAGAGTCAGAAGGACAAGCAGACT
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:8885573-8885592
CAATAATTAAGATGATCATATAGATCTCTT8885573CAAGAGAGAGATCACAAGTGGATCCGATCGAGAAAGAGAAAGAGAGAGAG
Cucumis melo genomic chromosome, chr_8.
LN713262.1:8285297-8285316
CAATAATTAAGATGATCATATAGATCTCTT8285297CAAGAGAGAGATCACAAGTGGATCCGATCGAGAAAGAGAAAGAGAGAGAG
Amblyjoppa proteus genome assembly, chromosome: 6.
OY998233.1:6532002-6532021
GGAGGGAGGAAGTTTCTTTTAGTAGCAGGG6532002CAAGAGAGAGATCACAAGTGGGGGGGGGGGGGGGGGGGAGGACTGGAGCA
Canis lupus familiaris breed Labrador retriever chromosome 28a.
CP050584.1:23766574-23766593
CTACAAGGAGCATGCTTCCTCTCCCTTCCC23766574CACTTGTGATCTCTCTCTTGCTATCTCTGTCGCTATCTCTGTCTCTTGGT
Canis lupus familiaris breed Labrador retriever chromosome 32a.
CP050598.1:13062015-13062034
GGGAGTCTGCTTCTCCCCCCTACCCCTCCC13062015CACTTGTGATCTCTCTCTTGCTCCCTCTCAAATAAATAGATAAAATCTTA
Canis lupus familiaris breed Labrador retriever chromosome 28b.
CP050626.1:23802343-23802362
CTACAAGGAGCATGCTTCCTCTCCCTTCCC23802343CACTTGTGATCTCTCTCTTGCTATCTCTGTCGCTATCTCTGTCTCTTGGT
Canis lupus familiaris breed Labrador retriever chromosome 32b.
CP050634.1:13056714-13056733
GGGAGTCTGCTTCTCCCCCCTACCCCTCCC13056714CACTTGTGATCTCTCTCTTGCTCCCTCTCAAATAAATAGATAAAATCTTA
Canis lupus genome assembly, chromosome: 28.
HG994413.1:24913459-24913478
CTACAAGGAGCATGCTTCCTCTCCCTTCCC24913459CACTTGTGATCTCTCTCTTGCTATCTCTGTCGCTATCTCTGTCTCTTGGT
Lutra lutra genome assembly, chromosome: 2.
LR738404.1:158411463-158411482
GCAATTTCCTCTTTCTCCCTCTACCCCTCC158411463CACTTGTGATCTCTCTCTTGCTCTCTCAAAATAAAAAAATAAAATTTTAA
Lutra lutra genome assembly, chromosome: X.
LR738421.1:66929898-66929917
TCCTCCTCTCTCTCTCTCTGCCTCTCTGCC66929898CACTTGTGATCTCTCTCTTGTCAGATAAATAAAATCTTAAAAAAAAAAAA
Meles meles genome assembly, chromosome: 3.
OV277443.1:101497773-101497792
AGTGGGGAGCCTGCTTCTTCCTCCCTTCCC101497773CACTTGTGATCTCTCTCTTGCTATCTATGACTCTCTCAAATAAATAAATG
Martes martes genome assembly, chromosome: 5.
OY734067.1:84778648-84778667
AGTGGGGAGCCTGCTTTTCCCTCCCTTCCC84778648CACTTGTGATCTCTCTCTTGCTATCTATGACTCTCTCAAATAAATAAATA
Mustela lutreola genome assembly, chromosome: 12.
OZ182605.1:82847055-82847074
AGTAGGGAGCCTGCTTCTCCCTCCCTTCCT82847055CACTTGTGATCTCTCTCTTGCTATCTATGGCTTTCTCAAATAAATAAATG
Mustela lutreola genome assembly, chromosome: 8.
OZ182612.1:45509585-45509604
TCCCCCGCTCTCTCTGCCTGACTCCCTGCC45509585CACTTGTGATCTCTCTCTTGTTCTGTCAAATAAATAAATAAAATTTATAA
Mustela nivalis genome assembly, chromosome: 3.
OZ211670.1:99931309-99931328
AGTAGGGAGCCTGCTTCTCCCTCCCTTCCC99931309CACTTGTGATCTCTCTCTTGCTATCTATGGCTTTCTCAAATAAATAAATG
EST1101924 Dulce mature fruit library Cucumis melo cDNA clone FR13H4, mRNA sequence.
DV633328.1:593-612
CTCTCTCTCTTTCTCTTTCTCGATCGGATC593CACTTGTGATCTCTCTCTTGAAGAGATCTATATGATCATCTTAATTATTG
EST1101925 Dulce mature fruit library Cucumis melo cDNA clone FR13H5, mRNA sequence.
DV633329.1:593-612
CTCTCTCTCTTTCTCTTTCTCGATCGGATC593CACTTGTGATCTCTCTCTTGAAGAGATCTATATGATCATCTTAATTATTG
EST1102975 Tam Dew mature fruit library Cucumis melo cDNA clone FR16K24, mRNA sequence.
DV634379.1:527-546
CTCTCTCTCTTTCTCTTTCTCGATCGGATC527CACTTGTGATCTCTCTCTTGAAGAGATCTATATGATCATCTTAATTATTG
EST11045149 PFLP2 library Cucumis melo cDNA clone DA5YG21FM1, mRNA sequence.
JG503436.1:611-630
CTCTCTCTCTTTCTCTTTCTCGATCGGATC611CACTTGTGATCTCTCTCTTGAAGAGATCTATATGATCATCTTAATTATTG
Cucumis melo genomic scaffold, anchoredscaffold00068.
LN681876.1:895788-895807
CTCTCTCTCTTTCTCTTTCTCGATCGGATC895788CACTTGTGATCTCTCTCTTGAAGAGATCTATATGATCATCTTAATTATTG
Hordeum bulbosum genome assembly, chromosome: 7H_3.
OY737509.1:239651442-239651461
CAAGAACACTTCATGTCATACTCCCATGGA239651442CACTTGTGATCTCTCTCTTGATGCGAGCCCATGATAATTACATAACCCTC
Hordeum bulbosum genome assembly, chromosome: 7H_3.
OY740968.1:239651442-239651461
CAAGAACACTTCATGTCATACTCCCATGGA239651442CACTTGTGATCTCTCTCTTGATGCGAGCCCATGATAATTACATAACCCTC
Amblyjoppa fuscipennis genome assembly, chromosome: 4.
OY754491.1:22001917-22001936
GTGCTATACTTGCTCCAGTCCTCCCCCCCC22001917CACTTGTGATCTCTCTCTTGCCCTGCTACTAAAAGAAACTTCCTCCCTCC
Streptopelia turtur genome assembly, chromosome: 12.
LR594561.1:19878929-19878948
GGCTTTTCTTACACAATATTTGAAGAATGG19878929CACTTGTGATCTCTCTCTTGTGCTCTCCCTCCATGGCGGTGTAATTAGCT
Argentina silus genome assembly, chromosome: X.
OX637366.1:48151341-48151360
CCAGAGAAGCGGCACAACTCTTGGTGCAAA48151341CACTTGTGATCTCTCTCTTGGCCGGGCTCCCCGCCTCTGCCATCAGGCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAGAGAGAGATCACAAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGAGAGAGATCACAAGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.268 | 0.259 | search_plus_done; http://172.18.8.135:50800/match?q=CAAGAGAGAGATCACAAGTG&k=0&no_gap=0&offset=0&limit=50
0.590 | 0.322 | search_minus_done; http://172.18.8.135:50800/match?q=CACTTGTGATCTCTCTCTTG&k=0&no_gap=0&offset=0&limit=32
0.605 | 0.015 | cgi_end;

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