GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 22:29:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo isolate PI 511890 chromosome 4.
CP136104.1:14820693-14820712
CTCATACCTCATGATCAATGTCTCCATTTT14820693CAAGATGCCCTTCAATTTCCATACTTCTAAACGCCTCCACAAGTGTCGTG
Cucumis melo genomic scaffold, anchoredscaffold00018.
LN681827.1:3558109-3558128
CTCATACCTCATGATCAATGTCTCCATTTT3558109CAAGATGCCCTTCAATTTCCATACTTCTAAACGCCTCCACAAGTGTCGTG
Cucumis melo genomic chromosome, chr_4.
LN713258.1:15115465-15115484
CTCATACCTCATGATCAATGTCTCCATTTT15115465CAAGATGCCCTTCAATTTCCATACTTCTAAACGCCTCCACAAGTGTCGTG
EST11040505 MNRP2 library Cucumis melo cDNA clone CA21YA05FM1, mRNA sequence.
JG498792.1:293-312
CACGACACTTGTGGAGGCGTTTAGAAGTAT293GGAAATTGAAGGGCATCTTGAAAATGGAGACATTGATCATGAGGATGCCG
Chrysolina haemoptera genome assembly, chromosome: 13.
OY282597.1:23668313-23668332
GTTCGAAAATGAAACTTCATTCTGAAGAAC23668313GGAAATTGAAGGGCATCTTGTACCTTATTGTTATAGAATTGAGTGTTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAGATGCCCTTCAATTTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGATGCCCTTCAATTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGATGCCCTTCAATTTCC&k=0&no_gap=0&offset=0&limit=50
0.206 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAATTGAAGGGCATCTTG&k=0&no_gap=0&offset=0&limit=47
0.207 | 0.001 | cgi_end;

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