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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:07:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis clone KBrH133A11, complete sequence.
FP017271.1:32786-32805
CTAAGACCAACTAACCAACCAAACAAAATT32786CAAGCAATAACCCTAAGAGCTATTGTCTATGAAAATGAGAATGCTTAAAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH052O08, complete sequence.
AC155342.2:37346-37365
CTAAGACCAACTAACCAACCAAACAAAATT37346CAAGCAATAACCCTAAGAGCTATTGTCTATGAAAATGAGAATGCTTAAAG
Brassica rapa clone BAC KBrH117M18, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC146875.2:67077-67096
CTTTAAGCATTCTCATTTTCATAGACAATA67077GCTCTTAGGGTTATTGCTTGAATTTTGTTTGGTTGGTTAGTTGGTCTTAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB005M10, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC232442.1:81732-81751
CTTTAAGCATTCTCATTTTCATAGACAATA81732GCTCTTAGGGTTATTGCTTGAATTTTGTTTGGTTGGTTAGTTGGTCTTAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB009G06, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces.
AC240986.1:128464-128483
CTTTAAGCATTCTCATTTTCATAGACAATA128464GCTCTTAGGGTTATTGCTTGAATTTTGTTTGGTTGGTTAGTTGGTCTTAG
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:1791678-1791697
CTTTAAGCATTCTCATTTTCATAGACAATA1791678GCTCTTAGGGTTATTGCTTGAATTTTGTTTGGTTGGTTAGTTGGTCTTAG
Brassica napus genome assembly, chromosome: A03.
HG994357.1:1840268-1840287
CTTGAAACATTCTCATTTTCATAGACAATA1840268GCTCTTAGGGTTATTGCTTGATGAATTTTGTTTGGTTGGTTAGTTGGTCT
Brassica rapa genome, scaffold: A03.
LR031572.1:1790619-1790638
CTTTAAGCATTCTCATTTTCATAGACAATA1790619GCTCTTAGGGTTATTGCTTGAATTTTGTTTGGTTGGTTAGTTGGTCTTAG
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:1791466-1791485
CTTTAAGCATTCTCATTTTCATAGACAATA1791466GCTCTTAGGGTTATTGCTTGAATTTTGTTTGGTTGGTTAGTTGGTCTTAG
Dioctria linearis genome assembly, chromosome: 4.
OZ005743.1:29581866-29581885
GCTTCTGTTTGTATGGTTCTTTTCCATGTA29581866GCTCTTAGGGTTATTGCTTGTTAGAAACGTTGTTTATTGCACGACATTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAGCAATAACCCTAAGAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGCAATAACCCTAAGAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGCAATAACCCTAAGAGC&k=0&no_gap=0&offset=0&limit=50
0.283 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=GCTCTTAGGGTTATTGCTTG&k=0&no_gap=0&offset=0&limit=48
0.289 | 0.006 | cgi_end;

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