GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 01:45:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Fish metagenome RNA, contig: contig9317_C2339398, isolate: DFGC7.
LA230869.1:103-122
GCAGTTTAAACTTGGCTAGGCCGGATGCTA103CAAGGCCCTACACAAGATCAAGCACAGGCTCAACACTCACCAATGCCTCT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:147433279-147433298
AAAAGTGTCACAAAAGCGCAAAAACGGAAC147433279CAAGGCCCTACACAAGATCACTTGGATTATACTAACTAGACAGTGTTTCA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:153155189-153155208
AAAAGTGTCACAAAAGCGCAAAAACGGAAC153155189CAAGGCCCTACACAAGATCACTTGGATTATACTAACTAGACAGTGTTTCA
Chenopodium album genome assembly, chromosome: 9.
OX419216.1:67174827-67174846
CGTCGTAAAGTGCAAGTGCAAAGACCGAAC67174827CAAGGCCCTACACAAGATCAACAATGAATCTTACAAGATTTCATAATCTG
Chenopodium album genome assembly, chromosome: 27.
OX419234.1:31693179-31693198
TGTCGTAAAGTGCAAGTGCAAAGACCGAAC31693179CAAGGCCCTACACAAGATCAACAATGAATCTTACAAGATTTCATAGTCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAAGGCCCTACACAAGATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGGCCCTACACAAGATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.132 | 0.123 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGGCCCTACACAAGATCA&k=0&no_gap=0&offset=0&limit=50
0.160 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=TGATCTTGTGTAGGGCCTTG&k=0&no_gap=0&offset=0&limit=45
0.160 | 0.000 | cgi_end;

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