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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:46:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sphaeramia orbicularis genome assembly, chromosome: 19.
LR597476.1:13993462-13993481
TAGTCCAAAATGTTGGTGTTCATCTGTATA13993462CAAGGCGTGTGTCATATCGTTCTCATACTCGTCAAATCAATAAATGAGGA
atr01-10ms1-b07 Atr01 Amborella trichopoda cDNA clone atr01-10ms1-b07 5', mRNA sequence.
CD482303.2:307-326
CGTGCGGCGCTCAGGCTTTTGGGGCCAGGT307CAAGGCGTGTGTCATATCGTTCTTCTGTACCTGTAACAATTCTGAGTCTC
Lymantria dispar genome assembly, chromosome: 11.
OY755136.1:15268805-15268824
ACTGAAGTAGCATTTAATATTTTAATCTCG15268805CAAGGCGTGTGTCATATCGTCTCTGTAGTCTGTAGCTCTCGTGTACGATT
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 2.
CP125974.1:316828121-316828140
ACTCACCAAGTTCCCAAAACCCTCCCAATA316828121ACGATATGACACACGCCTTGGGTTTTTAGAAAACTTTAAGTTTTAAAAGG
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 2.
CP125974.1:316854288-316854307
ACTCACCAAGTTCCCAAAACCCTCCCAATA316854288ACGATATGACACACGCCTTGGGTTTTTAGAAAACTTTAAGTTTTGAAAGG
Avena atlantica genome assembly, chromosome: 1A.
OU342733.1:220937676-220937695
ACTCACCAAGTTCCCAAAACCCTCCCAATA220937676ACGATATGACACACGCCTTGGGATTTTAGAAAACTTTAAGTTTTTAAAGG
Avena atlantica genome assembly, chromosome: 1A.
OU342733.1:220963859-220963878
ACTCACCAAGTTCCCAAAACCCTCCCAATA220963859ACGATATGACACACGCCTTGGGTTTTTAGAAAACTTTAAGTTTTGAAAGG
Avena longiglumis genome assembly, chromosome: 1A.
OU342747.1:224393157-224393176
ACTCACCAAGTTCCCAAAACCCTCCCAATA224393157ACGATATGACACACGCCTTGGGTTTTTAGAAAACTTTAAGTTTTGAAAGG
Avena longiglumis genome assembly, chromosome: 1A.
OU342747.1:224419349-224419368
ACTCACCAAGTTCCCAAAACCCTCCCAATA224419349ACGATATGACACACGCCTTGGGTTTTTAGAAAACTTTAAGTTTTGAAAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAGGCGTGTGTCATATCGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGGCGTGTGTCATATCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.182 | 0.173 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGGCGTGTGTCATATCGT&k=0&no_gap=0&offset=0&limit=50
0.284 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=ACGATATGACACACGCCTTG&k=0&no_gap=0&offset=0&limit=47
0.288 | 0.004 | cgi_end;

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