GGGenome | Results

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2025-04-08 18:27:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Apteryx australis mantelli genome assembly, scaffold: scaffold336.
LK064995.1:326415-326435

TCTGAGAGACAAAAAAGCAAGGCATTTCCA326415CAAGGTCTTTGCAAACTGAGTCTTCACAAACAAAGGTGAATAAAACTAGAA

Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:229589369-229589389

TCGTTGCCGATGTCCAAGATGAACTTGGCA229589369ACTCAGTTTGCAAAGACCTTGGAGGCTCATCCAACTCCATTTTCATCCATT

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:234229508-234229528

TCGTTGCCGATGTCCAAGATGAACTTGGCA234229508ACTCAGTTTGCAAAGACCTTGGAGGCTCATCCAACTCCATTTTCATCCATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
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You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGGTCTTTGCAAACTGAGT&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=ACTCAGTTTGCAAAGACCTTG&k=0&no_gap=0&offset=0&limit=49
0.137 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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