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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:23:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lactuca saligna genome assembly, chromosome: 1.
OX465077.1:137582732-137582755
GCTAATTTTCATGAAGTGTGTAGATTCTCT137582732CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGAGGTGTCACACTT
Lactuca saligna genome assembly, chromosome: 2.
OX465078.1:115316477-115316500
TAGCCAATTTCATGAGTTGTAGAATTCTCT115316477CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGAGGTGTCACACTT
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:49314479-49314502
ACCGATTTCATGAAGTGTTCTAGTTTCTCT49314479CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGAGGTGTCACACTT
Lactuca saligna genome assembly, chromosome: 5.
OX465081.1:235156371-235156394
AGCCGATTTTAGAAGTGTTAAAGTTTCTCT235156371CAAGTTATTCCAGGTGTATTTGGTGTTGTGTGAACCATTTGATGTGTCACACTT
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:49285228-49285251
AAGTGTGACACCTCAAATGGTTCACACAAC49285228ACCAAATACACCTGGAATAACTTGAGAGAAACTAGAACACTTCATGAAATCGGT
Lactuca saligna genome assembly, chromosome: 5.
OX465081.1:36062378-36062401
AAGTGTGACACCTCAAATGGCTCACAGAAC36062378ACCAAATACACCTGGAATAACTTGAGAGAAACTTGAACACTTCTAAAATTGGCT
Lactuca saligna genome assembly, chromosome: 6.
OX465082.1:102498107-102498130
AAGTGTGACACCTCAAATGGTTCAAAAAAC102498107ACCAAATACACCTGGAATAACTTGAGAGAATATACACACTTCATGAAAATCAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAAGTTATTCCAGGTGTATTTGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAAGTTATTCCAGGTGTATTTGGT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=CAAGTTATTCCAGGTGTATTTGGT&k=0&no_gap=0&offset=0&limit=50
0.268 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=ACCAAATACACCTGGAATAACTTG&k=0&no_gap=0&offset=0&limit=46
0.270 | 0.002 | cgi_end;

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