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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:05:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:39936461-39936480
TGAGATTCTCCCTTGCATGCCTTCCTTCTT39936461CAATAAACAATTTCCCATCCTTGGTATGTACTATGCAGAACACTTTCTTT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:36655399-36655418
AGATATTCTCCCTTGCATGCCTTCCTTCTT36655399CAATAAACAATTTCCCATCCTTGGTATGTACTATGCAGAACACTTTCTTT
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:40234297-40234316
TGAGATTCTCCCTTGCATGCCTTCCTTCTT40234297CAATAAACAATTTCCCATCCTTGGTATGTACTATGCAGAACACTTTCTTT
Malus domestica genome assembly, chromosome: 5.
OU696681.1:39525492-39525511
TGAGATTCTCCCTTGCATGCCTTCCTTCTT39525492CAATAAACAATTTCCCATCCTTGGTATGTACTATGCAGAACACTTTCTTT
Malus domestica genome assembly, chromosome: 5.
OU744546.1:39084046-39084065
TGAGATTCTCCCTTGCATGCCTTCCTTCTT39084046CAATAAACAATTTCCCATCCTTGGTATGTACTATGCAGAACACTTTCTTT
Malus domestica genome assembly, chromosome: 5.
OU744957.1:39546551-39546570
TGAGATTCTCCCTTGCATGCCTTCCTTCTT39546551CAATAAACAATTTCCCATCCTTGGTATGTACTATGCAGAATACTTTCTTT
Malus domestica genome assembly, chromosome: 5.
OU744995.1:40385197-40385216
TGAGATTCTCCCTTGCATGCCTTCCTTCTT40385197CAATAAACAATTTCCCATCCTTGGTATGTACTATGCAGAACACTTTCTTT
Crataegus laevigata genome assembly, chromosome: 4.
OY756941.1:35128993-35129012
TGAGATTCTCCCTTGCATGCCTGCATTCTT35128993CAATAAACAATTTCCCATCCTTGGTATGTACTATGTACGCAGTACACTTT
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:25260985-25261004
TGAGATTCTCCCTTGCATGCCTGCCTTCTT25260985CAATAAACAATTTCCCATCCTTGGTATGTACTATGTACGTAGTACACTTT
Escherichia coli TUM9812 DNA, complete genome.
AP026503.1:2846411-2846430
TGACGACGCCCCAAACCGCACCAGATACGG2846411CAATAAACAATTTCCCATCCGCATTTTCATTATGCCCCCTCTTGTGGTGG
Escherichia coli strain TUM9812 chromosome, complete genome.
CP128926.1:2846411-2846430
TGACGACGCCCCAAACCGCACCAGATACGG2846411CAATAAACAATTTCCCATCCGCATTTTCATTATGCCCCCTCTTGTGGTGG
Volucella inanis genome assembly, chromosome: 4.
OU026156.1:56406760-56406779
TCCGCACTAAAAATTCTTGTCCAAAAACAA56406760CAATAAACAATTTCCCATCCTTGTTGAAGTTTTCATTATTTTTTAGCCTT
Alloplasta piceator genome assembly, chromosome: 4.
OX333074.1:58431436-58431455
TCCGCAGAATAATTATTTTCCCTCCTCAGA58431436CAATAAACAATTTCCCATCCGTTGATCAAACGGTGAGTGATCAAATCCAT
Brachypterus glaber genome assembly, chromosome: 7.
OY294050.1:8536083-8536102
TTTTTTGCAGTTTTCAAATGTAGCTCTTTC8536083CAATAAACAATTTCCCATCCCCAGGTGCGGAAGTCCGCGACGGCGAGCGG
Brachypterus glaber genome assembly, chromosome: 9.
OY294052.1:32576743-32576762
TTTTTTGCAGTTTTCAAATGTAGCTCTTTC32576743CAATAAACAATTTCCCATCCCCAGGTGCGGAAGTCCGCGACGGCGAGCGG
Sepioteuthis lessoniana genome assembly, chromosome: 20.
OY757923.1:75522618-75522637
CTTGGTAAATAATAATATTTACAAGTATAA75522618CAATAAACAATTTCCCATCCTTTTATGATTAAATCATTTGAAGGAGCTTC
Peromyscus eremicus genome assembly, chromosome: 20.
OX460414.1:46854906-46854925
GGAGTAGAGATTCTATGAATCCCAAGCCCT46854906GGATGGGAAATTGTTTATTGCTTTGAATTTAGATCACAAAAACACAAAGC
Peromyscus eremicus genome assembly, chromosome: 20.
OX460486.1:48064377-48064396
GGAGTAGAGATTCTATGAATCCCAAGCCCT48064377GGATGGGAAATTGTTTATTGCTTTGAATTTAGATCACAAAAACACAAAGC
Cyprinus carpio genome assembly, scaffold: 000000680.
LN590890.2:67506-67525
CATATAAGAATTATCCATCTAATAACTAGT67506GGATGGGAAATTGTTTATTGATTGGANCCTTGGGATTAAAAGAATCAAAA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:6648706-6648725
AAAGAAAGTGTTCTGCATAGTGCATACCAA6648706GGATGGGAAATTGTTTATTGAAGAAGGAAGGCATGCAAGGGAGAATCTCA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:6893632-6893651
AAAGAAAGTATTCTGCATAGTACATACCAA6893632GGATGGGAAATTGTTTATTGAAGAAGGAAGGCATGCAAGGGAGAATCTCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:6321162-6321181
AAAGAAAGTGTTCTGCATAGTGCATACCAA6321162GGATGGGAAATTGTTTATTGAAGAAGGAAGGCATGCAAGGGAGAATCTCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:6810177-6810196
AAAGAAAGTGTTCTGCATAGTGCATACCAA6810177GGATGGGAAATTGTTTATTGAAGAAGGAAGGCATGCAAGGGAGAATCTCA
Comarum palustre genome assembly, chromosome: 1.
OX637572.1:41343657-41343676
GAAAGAAATAAAAGAAAGAGTCCATACCAA41343657GGATGGGAAATTGTTTATTGAAACGTCTAGGGCAGGAGATGATCATCATC
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:6604539-6604558
AAAGAAAGTATTCTGCATAGTACATACCAA6604539GGATGGGAAATTGTTTATTGAAGAAGGAAGGCATGCAAGGGAGAATCTCA
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:7006610-7006629
AAAGAAAGTGTTCTGCATAGTACATACCAA7006610GGATGGGAAATTGTTTATTGAAGAAGGAAGGCATGCAAGGGAGAATCTCA
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:5360705-5360724
AAAGAAAGTGTTCTGCATAGTACATACCAA5360705GGATGGGAAATTGTTTATTGAAGAAGGAAGGCATGCAAGGGAGAATCTCA
Escherichia coli PSS-15 DNA, complete genome.
AP027709.1:2434420-2434439
CCACCACAAGAGGGGGCATAATGAAAATGC2434420GGATGGGAAATTGTTTATTGCCGTATCTGGTGCGGTTTGGGGCGTCGTCA
Escherichia coli strain E9 chromosome, complete genome.
CP104500.1:2140100-2140119
CCACCACAAGAGGGGGCATAATGAAAATGC2140100GGATGGGAAATTGTTTATTGCCGTATCTGGTGCGGTTTGGGGCGTCGTCA
Bombus hortorum genome assembly, chromosome: 7.
HG995194.1:5571784-5571803
TCTTTAAGTAACAGCGTATTCCTAATCTGT5571784GGATGGGAAATTGTTTATTGAGAGATCGCTGTTATTATTTCCGGTTGAAA
Bombus hypnorum genome assembly, chromosome: 11.
OU427030.1:15323384-15323403
TCTTTAAGTAATGGCGTATTCCTAATCCGT15323384GGATGGGAAATTGTTTATTGAGAGATCGCTGTTATTATTTCTGGTTGAAA
Bombus pratorum genome assembly, chromosome: 3.
OV883985.1:1091323-1091342
TCTTTAAGTAACGGCGTATTCCTAATCTGT1091323GGATGGGAAATTGTTTATTGAGAGATCGCTGTTATTATTTCTGGTTGAAA
Athrips mouffetella genome assembly, chromosome: 25.
OX383981.1:10739839-10739858
TATTTTATTATGTTTATCTTACCTGTTTTA10739839GGATGGGAAATTGTTTATTGAGGTAAATAGGTACTTATTGATTGGTTGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAATAAACAATTTCCCATCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATAAACAATTTCCCATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.193 | 0.184 | search_plus_done; http://172.18.8.135:50400/match?q=CAATAAACAATTTCCCATCC&k=0&no_gap=0&offset=0&limit=50
0.341 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=GGATGGGAAATTGTTTATTG&k=0&no_gap=0&offset=0&limit=34
0.352 | 0.011 | cgi_end;

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