GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:11:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Teleiodes luculella genome assembly, chromosome: 6.
OX419588.1:10329906-10329925
AACAAAGAGCAAGCACGGCGGCGGTTCAGG10329906CAATAAATTTCAGCGTTCGAGTTTATAACGAAAGTAAAATGGGCATGAAA
Lotus japonicus genomic DNA, chromosome 1, clone: LjB17A22, BM1966.
AP009638.1:63007-63026
TTATAATTTTTATTGATTTACGTTTTTCAA63007TCGAACGCTGAAATTTATTGAAGCATTTTTTGTGCTTATATTATACATCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:27158623-27158642
TTATAATTTTTATTGATTTAAGTTTTTCAA27158623TCGAACGCTGAAATTTATTGAATCATTTTTTGTGCTTATATTATACATCA
Seladonia tumulorum genome assembly, chromosome: 6.
OU565271.1:9753343-9753362
TTCCTATGGAAATATTCACTGAATATGGTA9753343TCGAACGCTGAAATTTATTGACGTGCACGTGGATAGAAGCAGGTTTCTTG
Carpatolechia fugitivella genome assembly, chromosome: 6.
OX579651.1:6743421-6743440
TTTCATGCCTATTTTACTTTCGTTATAAAC6743421TCGAACGCTGAAATTTATTGCTTCAGCCGCCGTGCTTGCTCTTTGTTGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAATAAATTTCAGCGTTCGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATAAATTTCAGCGTTCGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.108 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CAATAAATTTCAGCGTTCGA&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=TCGAACGCTGAAATTTATTG&k=0&no_gap=0&offset=0&limit=49
0.154 | 0.003 | cgi_end;

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