GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:36:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis cDNA, clone:PF010d09_r, 5'end.
AU187269.1:198-217
CAACAACAACAACAACAACAACAACAACAA198CAATAACGCGCTCAACAAGAAGTCGAGCCGCGCGTCGGGCGGCAAGTACG
Porphyra yezoensis cDNA, clone:PF028f12_r, 5'end.
AU188644.1:351-370
CAACAACAACAACAACAACAACAACAACAA351CAATAACGCGCTCAACAAGAAGTCGAGCCGCGCGTCGGGCGGCAAGTACG
Porphyra yezoensis cDNA, clone:PFL040a12_r, 5'end.
AU193086.1:345-364
CAACAACAACAACAACAACAACAACAACAA345CAATAACGCGCTCAACAAGAAGTCGAGCCGCGCGTCGGGCGGCAAGTACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAATAACGCGCTCAACAAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATAACGCGCTCAACAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CAATAACGCGCTCAACAAGA&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTGTTGAGCGCGTTATTG&k=0&no_gap=0&offset=0&limit=47
0.124 | 0.000 | cgi_end;

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