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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:46:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Anas platyrhynchos genome assembly, chromosome: 3.
LS423613.1:105341363-105341382
GGAAGCTATCTCTAGTGATTTCTGTGTTTT105341363CAATATGAATGGGGGAGGAGATAGGGGAAGGCAAGTTTGGGGAAGGCCAC
010531AAWA002862HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA002862, mRNA sequence.
CN887782.1:144-163
GGTGAAGAGGGAGGACAAAATTAATAGCAA144CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus domestica mRNA, microsatellite: MEST096, clone: SAM01_09_C04.
AB627248.1:257-276
GGTGAAGAGGGAGGACAAAATTAATAGCAA257CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141969.1:33169962-33169981
GGTGAAGATGGAGGACAAAATTAATAGCAA33169962CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141986.1:34035617-34035636
GGTGAAGAGGGAGGACAAAATTAATAGCAA34035617CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143374.1:33521170-33521189
GGTGAAGAGGGAGGACAAAATTAATAGCAA33521170CAATATGAATGGGGGAGGAGGAGGGGGTGGACTTACCACATCACCATTTG
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:31131294-31131313
GGTGAAGAGGGAGGACAACATTAATAGCAA31131294CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus domestica group IIc WRKY transcription factor (WRKY59) mRNA, complete cds.
MH150918.1:51-70
GGTGAAGAGGGAGGACAAAATTAATAGCAA51CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus sylvestris genome assembly, chromosome: 17.
OU696519.1:33119948-33119967
GGTGAAGAGGGAGGACAAAATTAATAGCAA33119948CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus domestica genome assembly, chromosome: 17.
OU696693.1:33385842-33385861
GGTGAAGAGGGAGGACAAAATTAATAGCAA33385842CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus domestica genome assembly, chromosome: 17.
OU744558.1:34109896-34109915
GGTGAAGAGGGAGGACAAAATTAATAGCAA34109896CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Malus domestica genome assembly, chromosome: 17.
OU744969.1:33124822-33124841
GGTGAAGAGGGAGGACAAAATTAATAGCAA33124822CAATATGAATGGGGGAGGAGGAGGGGGTGGACTTACCACATCACCATTTG
Malus domestica genome assembly, chromosome: 17.
OU745007.1:33267218-33267237
GGTGAAGAGGGAGGACAAAATTAATAGCAA33267218CAATATGAATGGGGGAGGAGGAGGGGGTGGACTTACCACATCACCATTTG
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:38879383-38879402
GGTGAAGAGGGAGGACAATATTAATAGGAA38879383CAATATGAATGGGGGAGGAGGAGGAGGTGGACTTACCACATCACCATTTG
Sarcophaga caerulescens genome assembly, chromosome: 5.
OV656868.1:37895781-37895800
TGATGTGAAGATAGTGACGTTATTATTGTA37895781CAATATGAATGGGGGAGGAGGAGGAGGCGCACAAAATTATATTAAACGAT
Caenorhabditis sp. 8 KK-2011 genome assembly, chromosome: V.
OY751550.1:11094659-11094678
TGATAACACGCAGAGATGAAGAGACGCAGA11094659CAATATGAATGGGGGAGGAGATAAGATTTTGCGATGAATAATGGCATTGA
Micromys minutus genome assembly, chromosome: 20.
OZ004800.1:46485961-46485980
CCTCTCTGCCTCCCAGTTCCTCCCTCCCTC46485961CTCCTCCCCCATTCATATTGACCCCCTTTTTGTATCTGGCTAGAAAACAA
Somateria mollissima genome assembly, chromosome: 3.
OX598304.1:12152654-12152673
GTGGCCTTCCCCAAACTTGCCTTCCCCTAT12152654CTCCTCCCCCATTCATATTGAAAACACAGAAATCACTAGAGATAGCTTCC
Somateria mollissima genome assembly, chromosome: 3.
OX598692.1:12187062-12187081
GTGGCCTTCCCCAAACTTGCCTTCCCCTAT12187062CTCCTCCCCCATTCATATTGAAAACACAGAAATCACTAGAGATAGCTTCC
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141926.1:679009-679028
CAAATGGTGATGTGGTAAGTCCACCTCCTC679009CTCCTCCCCCATTCATATTGTTGCTATTAATTTTGTCCTCCATCTTCACC
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141943.1:737846-737865
CAAATGGTGATGTGGTAAGTCCACCCCCTC737846CTCCTCCCCCATTCATATTGTTGCTATTAATTTTGTCCTCCCTCTTCACC
Aegilops sharonensis genome assembly, chromosome: 3S.
LR880968.1:889748687-889748706
GCCTACACCTTCAATGCAGGACTAGGAGTG889748687CTCCTCCCCCATTCATATTGCTATAATATCACACGTCGGTCGACCGAGCG
Aegilops longissima genome assembly, chromosome: 3S.
LR881071.1:849723480-849723499
GCCTACACCTTCAATGCAGGACTAGGAGTG849723480CTCCTCCCCCATTCATATTGCTATAATATCACACGTCGGTCGACCGAGCG
Malus x robusta genome assembly, chromosome: 11.
OY720335.1:743709-743728
CAAATGGTGATGTGGTAAGTCCACCTCCTC743709CTCCTCCCCCATTCATATTGTTGCTATTAATTTTGTCCTCCATCTTCACC
Zelleria hepariella genome assembly, chromosome: 14.
OX439392.1:12144416-12144435
ACAGTAGATTTTCGACATGCCAGCAACCGT12144416CTCCTCCCCCATTCATATTGATAGCTACATTTCTGTTTGTGACGCGCTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAATATGAATGGGGGAGGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATATGAATGGGGGAGGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.214 | 0.206 | search_plus_done; http://172.18.8.135:50400/match?q=CAATATGAATGGGGGAGGAG&k=0&no_gap=0&offset=0&limit=50
0.326 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCTCCCCCATTCATATTG&k=0&no_gap=0&offset=0&limit=34
0.332 | 0.006 | cgi_end;

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