GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-07 22:01:55, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pisum sativum genome assembly, chromosome: 7.
OZ075434.1:309769528-309769547
CTCAAGAGATAATATATTCTTGGTAAATTA309769528CAATTAAGCCCTCATCCAGATCAATGATTCTTATTTAGACACAAAAGCAC
Pisum sativum genome assembly, chromosome: 7.
OZ173756.1:309587440-309587459
CTCAAGAGATAATATATTCTTGGTAAATTA309587440CAATTAAGCCCTCATCCAGATCAATGATTCTTATTTAGACACAAAAGCAC
Caretta caretta genome assembly, chromosome: SLK063_ragtag_3.
OZ220765.1:116640250-116640269
GGAACCTGTCTCTGTGTACAGAGCCTAGAA116640250CAATTAAGCCCTCATCCAGATAGAGGCATCTGGGTGTTGCTGTAGTATAA
Vicia faba genome assembly, chromosome: 1L.
OX451736.1:1464893138-1464893157
GTATTCTTGAGTCTAAGTGATGATAATTGT1464893138TCTGGATGAGGGCTTAATTGAAATTTATTAAGAGTGTATTATTACTTGAG
Vicia parviflora genome assembly, chromosome: 6.
OZ246706.1:358482090-358482109
GTATTCTTAAGTCTAAGTGAGGATATTTGT358482090TCTGGATGAGGGCTTAATTGTAATTTAAGAAGAGTGCATTATCTCTTGAT
Symsagittifera roscoffensis genome assembly, chromosome: 6.
OY783239.1:30277180-30277199
CCCCGCCGCTTACGGTGTTGAAATCCAACA30277180TCTGGATGAGGGCTTAATTGTCGTAAAAACAATCGAAAAGTTTTGAAGCT
Caretta caretta isolate rCarCar2 genome assembly, chromosome: 3.
OZ222810.1:94395396-94395415
TTATACTACAGCAACACCCAGATGCCTCTA94395396TCTGGATGAGGGCTTAATTGTTCTAGGCTCTGTACACAGAGACAGGTTCC
Lepidochelys olivacea isolate rLepOli2 genome assembly, chromosome: 3.
OZ222857.1:94063182-94063201
TTATACTACAGCAACACCCAGATGACTCTA94063182TCTGGATGAGGGCTTAATTGTGTTAGGCTCTGTACACACAGACAGGTTCC
Caretta caretta isolate rCarCar2 genome assembly, chromosome: 3.
OZ222927.1:95236414-95236433
TTATACTACAGCAACACCCAGATGCCTCTA95236414TCTGGATGAGGGCTTAATTGTTCTAGGCTCTGTACACAGAGACAGGTTCC
Lepidochelys olivacea isolate rLepOli2 genome assembly, chromosome: 3.
OZ223114.1:94314179-94314198
TTATACTACAGCAACACCCAGATGACTCTA94314179TCTGGATGAGGGCTTAATTGTGTTAGGCTCTGTACACACAGACAGGTTCC
Lepidochelys kempii isolate rLepKem1 genome assembly, chromosome: 3.
OZ223561.1:94585356-94585375
TTATACTACAGCAACACCCAGATGACTCTA94585356TCTGGATGAGGGCTTAATTGTGTTAGGCTCTGTACACACAGACAGGTTCC
Lepidochelys kempii isolate rLepKem1 genome assembly, chromosome: 3.
OZ223589.1:93418370-93418389
TTATACTACAGCAACACCCAGATGACTCTA93418370TCTGGATGAGGGCTTAATTGTGTTAGGCTCTGTACACACAGACAGGTTCC
Eretmochelys imbricata isolate rEreImb1 genome assembly, chromosome: 3.
OZ223884.1:93605218-93605237
TTATACTACAGCAACACCCAGATGCCTCTA93605218TCTGGATGAGGGCTTAATTGTGTTAGGCTCTGTACACACAGACAGGTTCC
Eretmochelys imbricata isolate rEreImb1 genome assembly, chromosome: 3.
OZ223913.1:93553988-93554007
TTATACTACAGCAACACCCAGATGCCTCTA93553988TCTGGATGAGGGCTTAATTGTGTTAGGCTCTGTACACACAGACAGGTTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAATTAAGCCCTCATCCAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAATTAAGCCCTCATCCAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.427 | 0.418 | search_plus_done; http://172.18.8.135:50900/match?q=CAATTAAGCCCTCATCCAGA&k=0&no_gap=0&offset=0&limit=50
0.752 | 0.325 | search_minus_done; http://172.18.8.135:50900/match?q=TCTGGATGAGGGCTTAATTG&k=0&no_gap=0&offset=0&limit=47
0.760 | 0.008 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).