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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:28:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gossypium hirsutum clone BAC Chr11_9_UCR49 sequence, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
MW008617.1:39894-39915
TGACTGAAAATTTATTATCAAAGTTAACTC39894CACAACATTCTCAACATGGAGAATCGTTTCGCAGGCTAGCTCCACCACTTTC
M.truncatula DNA sequence from clone MTH2-139F11 on chromosome 3.
CU019603.9:94991-95012
AGTTATTGAGGATTTAATACCATGAAAGTG94991CACAACATTCTCAACATGGAGATTATAACTTGTGCAGCTGGAGAACGAGAAC
Medicago truncatula clone mth2-175a2, WORKING DRAFT SEQUENCE, 80 unordered pieces.
AC231349.10:519229-519250
GTTCTCGTTCTCCAGCTGCACAAGTTATAA519229TCTCCATGTTGAGAATGTTGTGCACTTTCATGGTATTAAATCCTCAATAACT
Gossypium hirsutum cultivar TM1 chromosome A11.
CP023743.1:60846523-60846544
GAAAGTGGTGGAGCTAGCCTGCGAAACGAT60846523TCTCCATGTTGAGAATGTTGTGGAGTTAACTTTGATAATAAATTTTCAGTCA
Gossypium herbaceum isolate GPA1alz chromosome 11.
CP106704.1:125293961-125293982
GAAAGTGGTGGAGCTAGCCTGCGAAACGAT125293961TCTCCATGTTGAGAATGTTGTGGAGTTAACTTTGATAATAAATTTTCAGTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACAACATTCTCAACATGGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACAACATTCTCAACATGGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.165 | 0.156 | search_plus_done; http://172.18.8.135:50400/match?q=CACAACATTCTCAACATGGAGA&k=0&no_gap=0&offset=0&limit=50
0.253 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCCATGTTGAGAATGTTGTG&k=0&no_gap=0&offset=0&limit=48
0.255 | 0.002 | cgi_end;

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