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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 08:55:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

0190133 Brassica napus Leaf - drought Brassica napus cDNA, mRNA sequence.
EV216274.1:153-172
TGCCTCTATGTTTCAAAAGAGATACATCAT153CACAACGCTGACAAGTACCAAAAACTTCACAACTCTTGCCCCTAAGAGAA
0138732 Brassica napus Root - drought Brassica napus cDNA, mRNA sequence.
EV222525.1:158-177
TGCCTCTATGTTTCAAAAGAGATACATCAT158CACAACGCTGACAAGTACCAAAAACTTCACAACTCTTGCCCCTAAGAGAA
Brassica napus genome assembly, chromosome: C07.
HG994371.1:53330642-53330661
TGCCTCTATGTTTCAAAAGAGATACATCAT53330642CACAACGCTGACAAGTACCAAAAACTTCACAACTCTTGCCCCTAAGAGAA
Brassica oleracea var. viridis mRNA, clone: KALE-086M03, 3' end sequence.
DK548308.1:684-703
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT684TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA
Brassica oleracea var. viridis mRNA, clone: KALE-087M07, 3' end sequence.
DK548695.1:679-698
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT679TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA
Brassica oleracea var. viridis mRNA, clone: KALE-096A19, 3' end sequence.
DK551866.1:704-723
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT704TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA
Brassica oleracea var. viridis mRNA, clone: KALE-111A24, 3' end sequence.
DK557600.1:650-669
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT650TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA
Brassica oleracea var. viridis mRNA, clone: KALE-116A22, 3' end sequence.
DK559497.1:673-692
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT673TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA
Brassica oleracea var. viridis mRNA, clone: KALE-126P15, 3' end sequence.
DK563670.1:592-611
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT592TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA
Brassica oleracea var. viridis mRNA, clone: KALE-150F15, 3' end sequence.
DK572609.1:663-682
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT663TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:2320540-2320559
TTCTCTTAGGGGCAAGAGTTGTGAAGTTTT2320540TGGTACTTGTCAGCGTTGTGATGATGTATCTCTTTTGAAACATAGAGGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACAACGCTGACAAGTACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACAACGCTGACAAGTACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.347 | 0.338 | search_plus_done; http://172.18.8.135:50400/match?q=CACAACGCTGACAAGTACCA&k=0&no_gap=0&offset=0&limit=50
0.852 | 0.505 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTACTTGTCAGCGTTGTG&k=0&no_gap=0&offset=0&limit=47
0.857 | 0.005 | cgi_end;

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