GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:00:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Chionomys nivalis genome assembly, chromosome: 13.
OX465461.1:6179968-6179988
TCCAACAATATAATGAAGATTTTACACAAA6179968CACACACCAACACCATCACTCAGCAATGTTAACACAGATTTACAGTTTTTA
Danio aesculapii genome assembly, chromosome: 12.
LR812518.1:48613099-48613119
ATAGTGTGACCGCAGCTAAACACACACACA48613099CACACACCAACACCATCACTCTTAATTAATCACTCAAACGAAGCTGCTGTT
Bufo bufo genome assembly, chromosome: 6.
LR991672.1:199419959-199419979
AAGGTTCAGAGGAATTCTGGTCTGAGTCTC199419959CACACACCAACACCATCACTCTTTCTATGGAAGGTGCACAATTTACGCAGC
E012391-024-012-L08-SP6 MPIZ-ADIS-024-leaf Beta vulgaris cDNA clone 024-012-L08 5-PRIME, mRNA sequence.
BQ586547.1:5-25
CCCA5CACACACCAACACCATCACTCTCTCTCTCTCTCTCTCCTAGGAAAAATAAC
CCCG1855.b1 CCCG Cercospora beticola infected sugar beet leaves Beta vulgaris/Cercospora beticola mixed EST library cDNA clone CCCG1855 5', mRNA sequence.
GT743561.1:26-46
CTCTCTTCCTCACCACCACATCCCA26CACACACCAACACCATCACTCTCTCTCTCTCTCTCTCCTAGGAAAAATAAC
Borostomias antarcticus genome assembly, chromosome: 6.
OX465209.1:786602-786622
GTGTGAGAGAGAGAGAGAGAGAGAGAGAGT786602GAGTGATGGTGTTGGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAG
Cercospora sp. J1 LZ-2022 chromosome 4.
CP095191.1:372074-372094
GAATGGAAGAGGTTTTCTTTGTCGTTGCGG372074GAGTGATGGTGTTGGTGTGTGGGTGGGGGACCAGGGTTAATTGGGAGGAGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:42347406-42347426
GTTATTTTTCCTAGGAGAGAGAGAGAGAGA42347406GAGTGATGGTGTTGGTGTGTGTGGGATGTGGTGGTGAGGAAGAGAGAGAGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392560.1:38232385-38232405
GTTATTTTTCCTAGGAGAGAGAGAGAGAGA38232385GAGTGATGGTGTTGGTGTGTGTGGGATGTGGTGGTGAGGAAGAGAGAGAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACACACCAACACCATCACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACACACCAACACCATCACTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.208 | 0.200 | search_plus_done; http://172.18.8.135:50400/match?q=CACACACCAACACCATCACTC&k=0&no_gap=0&offset=0&limit=50
0.246 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTGATGGTGTTGGTGTGTG&k=0&no_gap=0&offset=0&limit=45
0.248 | 0.003 | cgi_end;

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