GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 05:08:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Coregonus sp. 'balchen' genome assembly, chromosome: 29.
LR778281.1:18308786-18308805
TACTTTAAAATGGTTTCATATTGCAGTATG18308786CACACATCCAGTGCCATTTCTAGGCATAAGCCACTTAGGGCCCCCAACCC
Vigna angularis mRNA, clone: VES10K07.
HX946101.1:350-369
AGGAAAACAGACCCAAAATAATGTCCCCTA350CACACATCCAGTGCCATTTCCTGCAGACTACGCTACTAATCCTCCTTATA
Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:15738517-15738536
AGGAAAACAGACCCAAAATAATGTCCCCTA15738517CACACATCCAGTGCCATTTCCTGCAGACTACGCTACTAATCCTCCTTATA
Euphorbia lathyris genome assembly, chromosome: 1.
OY755220.1:113277260-113277279
GAAAAGAAAATCGATGTGAGCTCTAGCACC113277260CACACATCCAGTGCCATTTCCAAACACCTCCTGACATTCTCCGGTGAAAC
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:49462881-49462900
GAAAAGAAAACCGATGTGAGCTCTAGCACC49462881CACACATCCAGTGCCATTTCTAAACACCTCCTGACATTCTCTGATGAAAC
Euphorbia lathyris genome assembly, chromosome: 3.
OY755222.1:108220644-108220663
GAAAAGAAAACTGATGTGCGCTCTAGCACC108220644CACACATCCAGTGCCATTTCCAAACACCTCCTGACATTCTCCGATGAAAC
Euphorbia lathyris genome assembly, chromosome: 4.
OY755223.1:95930015-95930034
AAAGAAAACCGATGTGTGAGCTCTAGCACC95930015CACACATCCAGTGCCATTTCCAAACACCTCCTGACATTCTACGATGAAAC
Euphorbia lathyris genome assembly, chromosome: 5.
OY755224.1:39994214-39994233
GAAAATAAAACCGATGTGAGCTCTAGCACC39994214CACACATCCAGTGCCATTTCCAAACACCTCCTGACCTTCTCCGGTGAAAC
Amaurobius ferox genome assembly, chromosome: 18.
OX578153.1:122025705-122025724
CGCATCCACAAACTCCTGGACACACGCTAA122025705CACACATCCAGTGCCATTTCAAATCATCATCATTATTACTTTGTGCAATT
Silurus aristotelis genome assembly, chromosome: 4.
OX327756.1:27869653-27869672
ATTAATCAATAATTAACTATCAATTATATT27869653GAAATGGCACTGGATGTGTGATATCTTGGGGAGAAAAAGGTCTGGTGAAG
Euphorbia lathyris genome assembly, chromosome: 2.
OY755221.1:55129177-55129196
GTTTCATCGGAAAAAGTCAGGAGGTGTTTG55129177GAAATGGCACTGGATGTGTGGGTGCTAGAGCTCACATCGGTTTTCTTTTC
Euphorbia lathyris genome assembly, chromosome: 2.
OY755221.1:55157775-55157794
GTTTCATCGGAAAAAGTCAGGAGGTGTTTG55157775GAAATGGCACTGGATGTGTGGGTGCTAGAGCTCACATCGGTTTTCTTTTC
Euphorbia lathyris genome assembly, chromosome: 4.
OY755223.1:3428105-3428124
ATTTCATCGGAGAATGTCAAGAGGTGTTTG3428105GAAATGGCACTGGATGTGTGGGTGCTAGAGCTCACATCGATTTTCTTTTC
Euphorbia lathyris genome assembly, chromosome: 4.
OY755223.1:28667266-28667285
GTTTCATCGGAGAATGTCAGGAGGTGTTTG28667266GAAATGGCACTGGATGTGTGGGTGCTAGAGGTCACATCGGTTTTCTTTAC
Euphorbia lathyris genome assembly, chromosome: 9.
OY755228.1:49782678-49782697
GTTTCATCGGAGAATGTCAGGAGGTGTTTG49782678GAAATGGCACTGGATGTGTGGGTGCTAGAGCTCACATCGATTTTCTTTTC
Triglochin maritima genome assembly, chromosome: 8.
OY821777.1:40098564-40098583
AAGGTCATTTGTTCGTGATGGAAATGAACT40098564GAAATGGCACTGGATGTGTGGGACAAAGAAGGTCAGGGAACACTAAAATA
Cepaea hortensis genome assembly, chromosome: 1.
OY992876.1:374924542-374924561
AATGTAGTTCCATATTTTAATGGACCAATT374924542GAAATGGCACTGGATGTGTGATGTTGCAAATTTCAAACTTCACTTCGCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACACATCCAGTGCCATTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACACATCCAGTGCCATTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.197 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=CACACATCCAGTGCCATTTC&k=0&no_gap=0&offset=0&limit=50
0.227 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GAAATGGCACTGGATGTGTG&k=0&no_gap=0&offset=0&limit=41
0.233 | 0.005 | cgi_end;

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