GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:54:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Macaca fascicularis complete genome, chromosome chr1.
LT160000.1:132535135-132535154
CTCACCTCATGGGGAGAAGAGCCTGTAAGG132535135CACACATCTGTTCCCTGGTGGGCCCCTCCCTCCCTCATCTCCCTCATCTC
Peromyscus eremicus genome assembly, chromosome: 10.
OX460404.1:93316574-93316593
AATGCACAACTCTCCCCTCTTCCATTCCCC93316574CACACATCTGTTCCCTGGTGCTCAGGGCATTTTCCCTCTCTGTGTTCCCA
Peromyscus eremicus genome assembly, chromosome: 10.
OX460476.1:92362975-92362994
AATGCACAACTCTCCCCTCTTCCATTCCCC92362975CACACATCTGTTCCCTGGTGCTCAGGGCATTTTCCCTCTCTGTGTTCCCA
Macaca mulatta clone CH250-215N15, WORKING DRAFT SEQUENCE, 2 ordered pieces.
AC196669.7:110623-110642
GAGATGAGGGAGATGAGGGAGGGAGGGGCC110623CACCAGGGAACAGATGTGTGCCTTACAGGCTCTTCTCCCCATGAGGTGAG
Daucus carota subsp. sativus cultivar DH1 chromosome 1.
CP093343.1:45209964-45209983
CCATCGCAGCTAGCACTGTCCTGGGTTCAT45209964CACCAGGGAACAGATGTGTGTCCTATTCCTGGGACTACCAAAATTGAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACACATCTGTTCCCTGGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACACATCTGTTCCCTGGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CACACATCTGTTCCCTGGTG&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=CACCAGGGAACAGATGTGTG&k=0&no_gap=0&offset=0&limit=47
0.126 | 0.001 | cgi_end;

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