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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-27 06:29:00, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Penaeus monodon contig_13378.Pemomix mRNA sequence.
JR203408.1:81-100
AGAAACCACTTGAAAAAAAAAACAAGCTAC81CACATTCACCTGTAAAATCTGCTAACTTGTAGAAGCTACTTAATTGTAAC
Agriphila geniculea genome assembly, chromosome: 10.
OX038879.1:23278488-23278507
TTGAAACTTACCAAAGAAATGTACATGTGT23278488CACATTCACCTGTAAAATCTATAGCCCTGGGGCTATTAGGTATTTTGTGA
Ceratothoa steindachneri genome assembly, chromosome: 9.
OZ018325.1:87507076-87507095
CCTGTAAAATCTTTCTAGTTTAAATTCATC87507076CACATTCACCTGTAAAATCTTTGGAGTTTAAATTCACCCAAGATTCACCT
Omphiscola glabra genome assembly, chromosome: 18.
OZ024811.1:1959351-1959370
CACATTCACTTGTACAATCTCTTGATTGTT1959351CACATTCACCTGTAAAATCTCTTGATTGTTCACATTCACCTGTACAATGT
Veronica serpyllifolia genome assembly, chromosome: 1.
OZ078796.1:9183519-9183538
AATTGGAGTGTTCACATGTAAATAAGCCGG9183519AGATTTTACAGGTGAATGTGAGGGCGGCTCGATTGGTAGATACGTTGGGG
Anisus vorticulus genome assembly, chromosome: 15.
OZ182233.1:44705623-44705642
TATTCTTATATGATAATTAAATTAAGAGAT44705623AGATTTTACAGGTGAATGTGTGTGTGTGTGTGTGTGTGTGAGTTAATTTA
Cerastoderma glaucum genome assembly, chromosome: 15.
OZ205195.1:42435531-42435550
TAAACCCCGTTTCGTTATCACACAGTTACA42435531AGATTTTACAGGTGAATGTGTCAATAAAAATATATCTTTAAAATCAGATG
Rhinatrema bivittatum genome assembly, chromosome: 18.
LR584404.1:10096280-10096299
GTGTTTTGCCAAGTTTTCGCATCGATGTCA10096280AGATTTTACAGGTGAATGTGAGAGGATGGGGCCGGGAGCAGAGTCAGATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACATTCACCTGTAAAATCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACATTCACCTGTAAAATCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.128 | 0.119 | search_plus_done; http://172.18.8.135:50800/match?q=CACATTCACCTGTAAAATCT&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.035 | search_minus_done; http://172.18.8.135:50800/match?q=AGATTTTACAGGTGAATGTG&k=0&no_gap=0&offset=0&limit=46
0.166 | 0.003 | cgi_end;

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