GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 17:55:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Solanum melongena mRNA, clone: SEP08I24, 5'end, expressed in sepal at 10d after anthesis.
FS062901.1:399-418
TGATAATGGGACGGAAAAAGGGAATCTTGA399CACATTGGTGAAAGCCATTGCTGGGGTTTCTGTCGGTAGTCAAACTGACC
Fulvitalea axinellae DSM 100852 DNA, complete genome.
AP025314.1:1352649-1352668
GCTTAACACCATTATCTACGACCACGACAT1352649CACATTGGTGAAAGCCATTGTGGATAAGGCCAAAACGGCTGGAATTACGG
Solanum melongena mRNA, clone: LS001B17, 3'end, expressed in ovary at anthesis.
FS017757.1:97-116
GGTCAGTTTGACTACCGACAGAAACCCCAG97CAATGGCTTTCACCAATGTGTCAAGATTCCCTTTTTCCGTCCCATTATCA
Narthecium ossifragum genome assembly, chromosome: 9.
OY986971.1:2267384-2267403
CGGCCTTTGTATTCAGGTTTTGGTTGTAAG2267384CAATGGCTTTCACCAATGTGGGCATGTAGATGGATGAAACGTACAGATTT
Leptopterna dolabrata genome assembly, chromosome: 9.
OX940983.1:17766403-17766422
TGTTTCACACCACTGACCTACCAGAGCCAC17766403CAATGGCTTTCACCAATGTGGAAAGCTTGCACTTCCTAACATTCTACGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACATTGGTGAAAGCCATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACATTGGTGAAAGCCATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.195 | 0.186 | search_plus_done; http://172.18.8.135:50400/match?q=CACATTGGTGAAAGCCATTG&k=0&no_gap=0&offset=0&limit=50
0.306 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=CAATGGCTTTCACCAATGTG&k=0&no_gap=0&offset=0&limit=48
0.308 | 0.002 | cgi_end;

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