GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:18:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Notothenia rossii genome assembly, chromosome: 8.
OX449118.1:18748218-18748237
TTATAAGCTCATTCATATCCTGACAGACAT18748218CACCATCCGTGTAGCCTTTTCATGTTGGCTATCATTTAAGATTAAAACAT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2714692-2714711
GGCCAATTTGCCTGACTCACGTATGCACGA2714692CACCATCCGTGTAGCCTTTTTGCCATGATTTCTGTAATTTTTCTTTGAAT
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2705163-2705182
GGCCAATTTGCCCGACTCACGTATGCACGA2705163CACCATCCGTGTAGCCTTTTTGCCATGATTTTCTGTAATTTTTCTTTGAA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2625369-2625388
GGCCAATTTGCCTGACTCACGTATGCACGA2625369CACCATCCGTGTAGCCTTTTTGCCATGATTTTCTGTAATTTTTCTTTGAA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2798338-2798357
GGCCAATTTGCCTGACTCACGTATGCACGA2798338CACCATCCGTGTAGCCTTTTTGCCATGATTTTCTGTAATTTTTCTTTGAA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2838290-2838309
GGCCAATTTGCCTGACTCACGTATGCACGA2838290CACCATCCGTGTAGCCTTTTTGCCATGATTTTCTGTAATTTTTCTTTGAA
Phlogophora meticulosa genome assembly, chromosome: 14.
LR990531.1:15476306-15476325
GGATAAACTGGCGACCTCTTGAGGGTTCCG15476306CACCATCCGTGTAGCCTTTTTGGCCTCGCACAGGTCCTATTATTTTTTTG
Pseudochaenichthys georgianus genome assembly, chromosome: 8.
LR792553.2:19757925-19757944
AAAACATAATCTTAAATGATAGGCAACATG19757925AAAAGGCTACACGGATGGTGATGTCTGTCAGGATATGAATGCGCTTATAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACCATCCGTGTAGCCTTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACCATCCGTGTAGCCTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CACCATCCGTGTAGCCTTTT&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAGGCTACACGGATGGTG&k=0&no_gap=0&offset=0&limit=43
0.134 | 0.001 | cgi_end;

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