GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 19:12:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC39k05_077, unspecified EST.
FY467967.1:21-40
CTACAATGTATCGCGTTCTT21CACCGCACCTTCTGTACCTTCGCAGAAGAATCAACCGCCGCCACCGCCGC
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:45809673-45809692
AAAAAGCACACTACAATGTATCGCGTTCTT45809673CACCGCACCTTCTGTACCTTCGCAGAAGAATCAACCGCCGCCACCGCCAC
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:42585782-42585801
AAAAAGCACACTACAATGTATCGCGTTCTT42585782CACCGCACCTTCTGTACCTTCGCAGAAGAATCAACCACCGCCGCCGCCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACCGCACCTTCTGTACCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACCGCACCTTCTGTACCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.177 | 0.169 | search_plus_done; http://172.18.8.135:50400/match?q=CACCGCACCTTCTGTACCTT&k=0&no_gap=0&offset=0&limit=50
0.191 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=AAGGTACAGAAGGTGCGGTG&k=0&no_gap=0&offset=0&limit=47
0.191 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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