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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-01-10 01:47:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

PP_LBa0048-D01.F PP_LBa Prunus persica genomic 5', genomic survey sequence.
FI955735.1:323-344
CAAAGGAAGGTCCATACGAGTTCAAGCCTG323CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCTATTCA
ROSCOS_1431 Peach Genome SNP, InDel Search Library Prunus persica genomic, genomic survey sequence.
GS598136.1:155-176
CAAAGGAAGGTCCATACGAGTTCAAGCCTG155CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCCATTCA
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:12093892-12093913
CAAAGGAAGGTCCATATGAATTCAAGCCTG12093892CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCTATTCA
Dryas octopetala genome assembly, chromosome: 9.
OY992840.1:13956292-13956313
CAAAGGAAGGTCCATATGAATTCAAGCCCG13956292CACCTGCCTCTAGTACCAATGACATGTTTTCTTCTTTAAATTTTCCTATTCA
Inachis io genome assembly, chromosome: 1.
LR989896.1:2519425-2519446
GATAAGTGAGTTCGCGACGTAGCTTTTTGC2519425TCATTGGTACTAGAGGCAGGTGAGTGGATTTTATCGTTGGATGAATTGATTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACCTGCCTCTAGTACCAATGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACCTGCCTCTAGTACCAATGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.393 | 0.385 | search_plus_done; http://172.18.8.135:50400/match?q=CACCTGCCTCTAGTACCAATGA&k=0&no_gap=0&offset=0&limit=50
0.502 | 0.108 | search_minus_done; http://172.18.8.135:50400/match?q=TCATTGGTACTAGAGGCAGGTG&k=0&no_gap=0&offset=0&limit=46
0.502 | 0.001 | cgi_end;

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