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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 16:52:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Solanum melongena mRNA, clone: MLF07C16, 3'end, expressed in leaf at fully expanded leaf.
FS026626.1:284-305
CAAGCTTCCATTATCTGCTACTATCATTTT284CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCGCC
Solanum melongena mRNA, clone: SmFL38J07, 3'end.
FS092684.1:297-318
CAAGCTTCCATTATCTGCTACTATCATTTT297CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCGCC
KS26059H04 KS26 Capsicum annuum cDNA, mRNA sequence.
GD135105.1:219-240
CAAGCTTCCATCATTTGCCACCATCATTTT219CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCGCT
TSA: Capsicum annuum MGMT_Contig35233 mRNA sequence.
JW085477.1:361-382
CAAGCTTCCATCATTTGCCACCATCATTTT361CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCGCT
TSA: Nicotiana benthamiana isotig06889.Nb_leaf mRNA sequence.
KA743133.1:86-107
CAAGCTTCCATCATCTCCTACCGTCATTTT86CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCGCT
CHO_OF3288xa10r1.ab1 CHO_OF3 Nicotiana tabacum genomic 3', genomic survey sequence.
FH121427.1:261-282
CAAGCTTCCATCATCTCCTACCGTCATTTT261CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCCTG
CHO_OF4660xl13r1.ab1 CHO_OF4 Nicotiana tabacum genomic 3', genomic survey sequence.
FH591774.1:411-432
CAAGCTTCCATCATCTCCTACCGTCATTTT411CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCCTG
CHO_OF5094xj11r1.ab1 CHO_OF5 Nicotiana tabacum genomic 3', genomic survey sequence.
FH689214.1:151-172
CAAGCTTCCATCATCTCCTACCATCATTTT151CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATATGCCCCTG
CHO_OF6448xi08f1.ab1 CHO_OF6 Nicotiana tabacum genomic 5', genomic survey sequence.
FI034066.1:9-30
GTCATTTT9CACCTTGATCTGCTCCTTTCTGGATGCTCGAGTCCAATAATATACACCCCTG
KL4B.103A06F.051103T7 KL4B Nicotiana tabacum cDNA clone KL4B.103A06, mRNA sequence.
DV999435.1:732-753
AGCGGGCATATATTATTGGACTCGAGCATC732CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTAGGAGACGATGGAAGCTTG
KF8C.102G07F.051214T7 KF8 Nicotiana tabacum cDNA clone KF8C.102G07, mRNA sequence.
EB425106.1:717-738
AGCGGGTGTATATTATTGGACTCGAGCGTC717CAGAAAGGAGCAGATCAAGGTGAAAATGACGGTAGGAGATGATGGAAGCTTG
KG9B.103O05F.051128T7 KG9B Nicotiana tabacum cDNA clone KG9B.103O05, mRNA sequence.
EB678211.1:672-693
AGCGGGCATATATTATTGGACTCGAGCATC672CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTAGGAGATGATGGAAGCTTG
Solanum melongena mRNA, clone: SmFL07M06, 5'end.
FS071322.1:600-621
GGCGGGTGTATATTATTGGACTCGAGCATC600CAGAAAGGAGCAGATCAAGGTGAAAATGATAGTAGCAGATAATGGAAGCTTG
KS19005G10 KS19 Capsicum annuum cDNA, mRNA sequence.
GD087875.1:541-562
AGCGGGTGTATATTATTGGACTCGAGCATC541CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTGGCAAATGATGGAAGCTTG
KS26010A09 KS26 Capsicum annuum cDNA, mRNA sequence.
GD130661.1:113-134
AGCGGGTGTATATTATTGGACTCGAGCATC113CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTGGCAAATGATGGAAGCTTG
NbME13C1 Nicotiana benthamiana mixed elicitor cDNA library (NbMEcDNA) Nicotiana benthamiana cDNA, mRNA sequence.
JZ764312.1:438-459
AGCGGGTGTATATTATTGGACTCGAGCATC438CAGAAAGGAGCAGATCAAGGTGAAAATGACGGTAGGAGATGATGGAAGCTTG
NTOM5284 Nicotiana tomentosiformis normalized full-length cDNA Library Nicotiana tomentosiformis cDNA 5', mRNA sequence.
JZ959743.1:195-216
AGCGGGCATATATTATTGGACTCGAGCATC195CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTAGGAGATGATGGAAGCTTG
NTOM7452 Nicotiana tomentosiformis normalized full-length cDNA Library Nicotiana tomentosiformis cDNA 5', mRNA sequence.
JZ965895.1:332-353
AGCGGGCATATATTATTGGACTCGAGCATC332CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTAGGAGATGATGGAAGCTTG
TSA: Petunia axillaris PETAX023419:Contig2 mRNA sequence.
JI344000.1:209-230
AGCGGGTGCATATTACTGGACTCGGGCATC209CAGAAAGGAGCAGATCAAGGTGAAAATGTTGATGGCAGAGGATGGAAGCTTG
TSA: Petunia integrifolia subsp. inflata PETIN007113:Contig1 mRNA sequence.
JI364198.1:339-360
AGCGGGTGCATATTACTGGACTCGGGCATC339CAGAAAGGAGCAGATCAAGGTGAAAATGTTAGATGGCAGATGATGGAAGCTT
TSA: Petunia integrifolia subsp. inflata PETIN007113:Contig2 mRNA sequence.
JI364199.1:203-224
AGCGGGTGCATATTACTGGACTCGGGCATC203CAGAAAGGAGCAGATCAAGGTGAAAATGTTGATGGCAGATGATGGAAGCTTG
TSA: Petunia integrifolia subsp. inflata PETIN007113:Contig3 mRNA sequence.
JI364200.1:204-225
AGCGGGTGCATATTACTGGACTCGGGCATC204CAGAAAGGAGCAGATCAAGGTGAAAATGTTGATGGCAGATGATGGAAGCTTG
CHO_OF3288xa10f1.ab1 CHO_OF3 Nicotiana tabacum genomic 5', genomic survey sequence.
FH121399.1:494-515
CAGGGGTGTATATTATTGGACTCGAGCATC494CAGAAAGGAGCAGATCAAGGTGAAAATGACGGTAGGAGATGATGGAAGCTTG
CHO_OF4660xl13f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH591690.1:600-621
CAGGGGTGTATATTATTGGACTCGAGCATC600CAGAAAGGAGCAGATCAAGGTGAAAATGACGGTAGGAGATGATGGAAGCTTG
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:3280666-3280687
CAGGGGTGTATATTATTGGACTCGAGCATC3280666CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTGGCAAATGATGGAAGCTTG
Solanum tuberosum cultivar P8 chromosome 2.
CP046680.1:7050307-7050328
CAGGGGTGTATATTATTGGACTCGAGCATC7050307CAGAAAGGAGCAGATCAAGGTGAAAATGATTGTAGCAGATGATGGAAGCTTG
Solanum tuberosum cultivar MSH/14-112 chromosome 2.
CP046695.1:7047765-7047786
CAGGGGTGTATATTATTGGACTCGAGCATC7047765CAGAAAGGAGCAGATCAAGGTGAAAATGATTGTAGCARATGATGGAWGCTTG
Solanum pinnatisectum cultivar CGN17745 chromosome 2.
CP047559.1:7047029-7047050
CAGGGGTGTATATTATTGGACTCGAGCATC7047029CAGAAAGGAGCAGATCAAGGTGAAAATGATTGTAGCAGATGATGGAAGCTTG
Solanum tuberosum cultivar Solyntus chromosome 2.
CP055235.1:8511301-8511322
CAGGGGTGTATATTATTGGACTCGAGCATC8511301CAGAAAGGAGCAGATCAAGGTGAAAATGATTGTAGCAGATGATGGAAGCTTG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 3.
CP124717.1:1506187-1506208
CAGGGGTGTATATTATTGGACTCGAGCATC1506187CAGAAAGGAGCAGATCAAGGTGAAAATGACGGTAGCAGATGATGGAAGCTTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:3406691-3406712
CAGGGGTGTATATTATTGGACTCGAGCATC3406691CAGAAAGGAGCAGATCAAGGTGAAAATGATGGTGGCAAATGATGGAAGCTTG
Solanum verrucosum cultivar 11H23 chromosome 2.
CP133613.1:7729090-7729111
CAGGGGTGTATATTATTGGACTCGAGCATC7729090CAGAAAGGAGCAGATCAAGGTGAAAATGATTGTAGCAAATGATGGAAGCTTG
Solanum dulcamara genome assembly, chromosome: 11.
OX359262.1:2816565-2816586
CAGGGGTGTATATTATTGGACTCGAGCATC2816565CAGAAAGGAGCAGATCAAGGTGAAAATGATTGTAGCAGATGATGGAAGCTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACCTTGATCTGCTCCTTTCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACCTTGATCTGCTCCTTTCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.039 | 1.030 | search_plus_done; http://172.18.8.135:50400/match?q=CACCTTGATCTGCTCCTTTCTG&k=0&no_gap=0&offset=0&limit=50
2.164 | 1.125 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAAAGGAGCAGATCAAGGTG&k=0&no_gap=0&offset=0&limit=41
2.180 | 0.016 | cgi_end;

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