GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-27 07:14:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VEPS04N17.
HX940249.1:76-95
CGATTTAATAAAAGGCCGTACGAAGCACGT76CACGAACGCAATTTAAAGCAGAAGAAGCGATTTATAAATTGTTTGGGTTG
Vigna angularis mRNA, clone: VES09B11.
HX945513.1:194-213
CGATTTAATAAAAGGCCGTACGAAGCACGT194CACGAACGCAATTTAAAGCAGAAGAAGCGATTTATAAATTGTTTGGGTTG
Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:7548542-7548561
CGATTTAATAAAAGGCCGTACGAAGCACGT7548542CACGAACGCAATTTAAAGCAGAAGAAGCGATTTATAAATTGTTTGGGTTG
Perizoma affinitatum genome assembly, chromosome: 16.
OY560200.1:1601721-1601740
ACTAAAATGTTTACTAGTTTTTAACACACT1601721CACGAACGCAATTTAAAGCAGCAATAACTTTTATCGGCTGTAAAAACAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACGAACGCAATTTAAAGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACGAACGCAATTTAAAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.262 | 0.253 | search_plus_done; http://172.18.8.135:50400/match?q=CACGAACGCAATTTAAAGCA&k=0&no_gap=0&offset=0&limit=50
0.280 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTTTAAATTGCGTTCGTG&k=0&no_gap=0&offset=0&limit=46
0.280 | 0.000 | cgi_end;

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