GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 01:23:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

GT_DBa165D09.R GT_DBa Glycine tomentella genomic 3', genomic survey sequence.
HN660267.1:445-462
ACACAGAGGGACACAAACCTAAGATAAGAA445CACGAGACTCCCTCCTAAGAAAACTCTCTTTCTTTTTTTTCTTCTACA
GT_DBa042P09.R GT_DBa Glycine tomentella genomic 3', genomic survey sequence.
HN681251.1:227-244
ACACAGAGGGACACAAACCTAAGATAAGAA227CACGAGACTCCCTCCTAAGAAAACTCTCTTTCTTTTTTTTCTTCTACA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB085J21, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.
AC232529.1:107401-107418
GATTCCTTTTGATCTCATGATTGATATTCT107401CACGAGACTCCCTCCTAAATCACTTATGAGGTTCAAATCTGTCTCAAA
Brassica napus cultivar Xiang5A chromosome 3.
CP123878.1:24711242-24711259
GATTCCTTTTGATCTCATGATTGATATTCT24711242CACGAGACTCCCTCCTAAATCACTTATGAGGTTCAAATCTGTCTCAAA
Brassica napus genome assembly, chromosome: A03.
HG994357.1:24864558-24864575
GATTCCTTTTGATCTCATGATTGATATTCT24864558CACGAGACTCCCTCCTAAATCACTTATGAGGTTCAAATCTGTCTCAAA
Brassica rapa genome, scaffold: A03.
LR031572.1:24315659-24315676
GATTCCTTTTGATCTCATGATTGATATCCT24315659CACGAGACTCCCTCCTAAATCACTCATGAGGTTCAAATCTGTCTCAAA
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:24443533-24443550
GATTCCTTTTGATCTCATGATTGATATCCT24443533CACGAGACTCCCTCCTAAATCACTCATGAGGTTCAAATCTGTCTCAAA
Thlaspi arvense genome assembly, chromosome: 7.
OU466863.1:9068728-9068745
GATTCCTTTTGATATCGTGATAGAGATTCT9068728CACGAGACTCCCTCCTAAATCCCTTATGAGATTCAAATCAGTCTCAGA
GD_TBa083C21.F GD_TBa Glycine dolichocarpa genomic 5', genomic survey sequence.
HN426505.1:250-267
TGTAGAAGAAAAAAAAGAAAGAGAGTTTTC250TTAGGAGGGAGTCTCGTGTTCTTATCTTAGGTTTGTGTCCCTCTGTGT
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH039L17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces.
AC241126.1:53427-53444
TTTGAGACAGATTTGAACCTCATAAGTGAT53427TTAGGAGGGAGTCTCGTGAGAATATCAATCATGAGATCAAAAGGAATC
Thlaspi arvense genome assembly, chromosome: 7.
OU466863.1:8801392-8801409
CTTGACACTGATTTGAACCTCATAAGGGAT8801392TTAGGAGGGAGTCTCGTGAGAATCTCTATCACGATATCAACAGGAATA
Alviniconcha strummeri genome assembly, chromosome: 6.
OY757546.1:21439608-21439625
ATAGAGGCGGAAATTAAAGAGCGGGCTCAC21439608TTAGGAGGGAGTCTCGTGCAGCAAGCCTGTTTTGTACTGATTTCCCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).