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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:59:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gadus morhua genome assembly, chromosome: 22.
LR633964.1:21948472-21948489
CTTTGACATGCCACCTTCATCCAGGGACAT21948472CACGCCCTCTCCCTAGATTAGAGGAAGGTCCGAGCAGTGCCCTGAAGA
Chroicocephalus ridibundus genome assembly, chromosome: 18.
OZ001751.1:9512929-9512946
GCTGTTAAGCCCCACCCCCTGGCTGCCAAC9512929CACGCCCTCTCCCTAGATGCCCCACACACGCTGTCTGACCACGCCTGC
Spirodela polyrhiza strain 9509 chromosome 3, partial sequence.
CP019095.1:1627667-1627684
TTCAACAAGCAGCTGCTGTGAAGAAAACAT1627667CACGCCCTCTCCCTAGATAGTCGCTCTTTCTCCTTAAGATATTTATCA
Taiwanofungus camphoratus strain M8 chromosome I.
CP021220.1:2969421-2969438
TCGTCTAATACTGCCATCAAAATATTCAGG2969421CACGCCCTCTCCCTAGATGAACATCGCGCCAAGTTTAAGGCGAATCAC
Avena eriantha genome assembly, chromosome: 5C.
OU342744.1:279826196-279826213
GAGTAGGGCCTGGTCATACTAGATTTGCAG279826196CACGCCCTCTCCCTAGATGTTGAGGTTGGCAACTGCTGCGTGCCCCAC
Martes martes genome assembly, chromosome: 14.
OY734077.1:74622963-74622980
AAGGACAGAAGATTAGGAACACACTCTAGT74622963ATCTAGGGAGAGGGCGTGGGTCTGACCGGCAGTGGTGTACGTGAATAC
Larus fuscus genome assembly, chromosome: 17.
OZ010770.1:93883-93900
GCAGGCGTGGTCAGACAGCGTGTGTGGGGC93883ATCTAGGGAGAGGGCGTGGTTGGCAGCCAGGGGGTGGGGCTTAACAGC
Nigrospora osmanthi strain Z1 chromosome 4.
CP120497.1:3309988-3310005
GGCACAGAGCTCAATCAGCATCGCCAGCCT3309988ATCTAGGGAGAGGGCGTGGAGGTTCCGTAGCGCAGCCTGAAAGGGCCC
Chrysolina oricalcia genome assembly, chromosome: 12.
OX101820.2:60762841-60762858
CCCTTGAGTGCAGTACTCGAAATTTCAGCC60762841ATCTAGGGAGAGGGCGTGGTGAGAAAACTTTCTGGAAAAGAACTTTCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACGCCCTCTCCCTAGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACGCCCTCTCCCTAGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.113 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=CACGCCCTCTCCCTAGAT&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.036 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTAGGGAGAGGGCGTG&k=0&no_gap=0&offset=0&limit=45
0.153 | 0.003 | cgi_end;

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