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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-15 15:48:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます(ミスマッチ挿入欠失

sf28a09.x1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-1265 3' similar to SW:PROC_SOYBN P17817 PYRROLINE-5-CARBOXYLATE REDUCTASE, mRNA sequence.
AW310006.1:455-489
CAGTTTGAGAAGCTAGACTTAATGAAAGAT455CACGTGGTAAACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAACATAAGCA
EST486126 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-15I22 5' end, mRNA sequence.
BG584366.1:628-662
CAGTCTGAGAAGCTAGACTTAATGCAAGAT628CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCCTGGTGCCGAATTCGGCACGAGCCGGCGGT
Glycine max cDNA clone: GMFL01-03-P02, 3'end.
BW651943.1:334-368
CAGTTTGAGAAGCTAGACTTAATGAAAGAT334CACGTGGTAAACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAACATAAGCA
EST636631 MTUS Medicago truncatula cDNA clone MTUS-4A10, mRNA sequence.
CA918913.1:486-520
CAGTCTGAGAAGCTAGACTTAATGCAAGAT486CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCTTCTATTGCTAAAATAATATAAGCA
Gm_ck9113 Soybean induced by Salicylic Acid Glycine max cDNA 3', mRNA sequence.
CD418103.1:477-511
CAGTTTGAGAAGCTAGACTTAATGAAAGAT477CACGTGGTAAACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAACATAAGCA
GM89004A2E07.r1 Gm-r1089 Glycine max cDNA clone Gm-r1089-1358 3, mRNA sequence.
CO979252.1:301-335
CAGTTTGAGAAGCTAGACTTAATGAAAGAT301CACGTGGTAAACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAACATAAGCA
GM89022A2B09.r1 Gm-r1089 Glycine max cDNA clone Gm-r1089-8130 3, mRNA sequence.
CO984803.1:232-266
CAGTTTGAGAAGCTAGACTTAATGAAAGAT232CACGTGGTAAACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAACATAAGCA
UCRVU05_CCNN18148_g1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN18148.g1, mRNA sequence.
FG852679.1:393-427
CAGTTTGAGAAGCTAGACTTAATGAAAGAT393CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAAAGCTTCTATTGCTAAATAAATGTACGCA
UCRVU09_CCNT12257_g1 Cowpea UCR 707 Mixed Tissue and Conditions cDNA Library UCRVU09-1-2 Vigna unguiculata cDNA clone CCNT12257.g1, mRNA sequence.
FG933023.1:393-427
CAGTTTGAGAAGCTAGACTTAATGAAAGAT393CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAAAGCTTCTATTGCTAAATAAATGTACGCA
MEUBH13TR JCVI-MT2 Medicago truncatula cDNA 3', mRNA sequence.
GE352603.1:590-624
CAGTCTGAGAAGCTAGACTTAATGCAAGAT590CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCTTCTATTGCTAAATAAATATAAGCA
METC964TR JCVI-MT3 Medicago truncatula cDNA 3', mRNA sequence.
GT142932.1:644-678
CAGTCTGAGAAGCTAGACTTAATGCAAGAT644CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCTTCTATTGCTAAATAAATATAAGCA
Kudzu-Sub-23_2008-04-10_1/Kudzu-Sub-23_I08_024_1 Kudzu subtraction cDNA library Pueraria montana var. lobata cDNA, mRNA sequence.
HO709786.1:445-479
CTGTTTGAGAAGCTAGACTTAATGAAAGAT445CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAATATAAGCA
vsu-ars_029985_LI15contig_12282 VSU-ARS-L15 Phaseolus acutifolius cDNA, mRNA sequence.
HO804952.1:156-190
CAGTTTGAGAAGCTAGACTTAATGAAAGAT156CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAAAGCTTCTATTGCTAAATAAATGTACGCA
Medicago truncatula chromosome 7 clone mth2-81g19, complete sequence.
AC153128.1:17451-17485
CAGTCTGAGAAGCTAGACTTAATGCAAGAT17451CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCTTCTATTGCTAAATAAATATAAGCA
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:38484744-38484778
CAGTTTGAGAAGCTAGACTTAATGAAAGAT38484744CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAAAGCTTCTATTGCTAAATAAATGTACGCA
Cicer arietinum chromosome Ca3.
CP039333.1:28755922-28755956
CAGTCTGAGAAGCTAAACTTAATGCAAGAT28755922CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCCTCTATTGCTAAATAAATATAAGCA
Cicer arietinum chromosome Ca3.
CP040768.1:28755922-28755956
CAGTCTGAGAAGCTAAACTTAATGCAAGAT28755922CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCCTCTATTGCTAAATAAATATAAGCA
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:38995003-38995037
CAGTCTGAGAAGCTAGACTTAATGCAAGAT38995003CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCCTCTATTGCTAAATAAATATAAGCA
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:38945239-38945273
CAGTCTGAGAAGCTAGACTTAATGCAAGAT38945239CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCCTCTATTGCTAAATAAATATAAGCA
Glycine max cultivar Williams 82 chromosome 3.
CP126428.1:37466449-37466483
CAGTTTGAGAAGCTAGACTTAATGAAAGAT37466449CACGTGGTAAACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAACATAAGCA
Glycine max cultivar Williams 82 chromosome 19.
CP126444.1:42202837-42202871
CAGTTTGAGAAGCTAGACTTAATGAAAGAT42202837CACGTGGTAAACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATTGCTAAATAAACATAAGCA
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:46967464-46967498
CGGTCTGAGAAGCTAGACTTAATGCAAGAT46967464CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAGAGCCTCTATTGCTAAATAAATATAAGCA
Vicia faba genome assembly, chromosome: 5.
OX451740.1:706076810-706076844
CAGTCTGAGAAGCTAGACTTAATGCAAGAT706076810CACGTGGTAGACCAGCTGCTACTCCTCCATCAGCCAAAGCCTCTATGGCTAAATAAATATAAGCA
Sequence 7596 from Patent WO2010046221.
HC750505.1:738-772
TGCTTATGTTTATTTAGCAATAGAGGCTTT738GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Sequence 7916 from Patent WO2010046221.
HC750825.1:579-613
TGCGTACATTTATTTAGCAATAGAAGCTTT579GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Sequence 7950 from Patent WO2010046221.
HC750859.1:579-613
TGCTTATGTTTATTTAGCAATAGAGGCTTT579GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Sequence 5412 from Patent EP2148885.
HI534440.1:6-40
GCTTT6GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTNNTNNACTGT
Sequence 71863 from patent US 9012723.
HK635517.1:177-211
TGCTTATGTTTATTTAGCAATAGAGGCTTT177GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Sequence 5412 from patent US 9271455.
HL707775.1:6-40
GCTTT6GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTNNTNNACTGT
Sequence 829 from patent US 10750711.
MV605940.1:579-613
TGCTTATGTTTATTTAGCAATAGAGGCTTT579GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Sequence 829 from patent US 11819027.
OT843976.1:579-613
TGCTTATGTTTATTTAGCAATAGAGGCTTT579GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Medicago truncatula EST MtBC13H05F1 : T3 end of clone MtBC13H05 of cDNA library MtBC from arbuscular mycorrhiza of cultivar Jemalong of Medicago truncatula (barrel medic).
AL383398.1:86-120
TGCTTATATTTATTTAGCAATAGAAGCTCT86GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
sf28a09.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-1265 5' similar to SW:PROC_SOYBN P17817 PYRROLINE-5-CARBOXYLATE REDUCTASE, mRNA sequence.
AW203277.1:417-451
TGCTTATGTTTATTTAGCAATAGAGGCTTT417GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
sk32g09.y1 Gm-c1028 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1028-3929 5' similar to SW:PROC_SOYBN P17817 PYRROLINE-5-CARBOXYLATE REDUCTASE, mRNA sequence.
AW666150.1:6-40
ACGAG6GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
so68f11.y1 Gm-c1040 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1040-838 5' similar to SW:PROC_SOYBN P17817 PYRROLINE-5-CARBOXYLATE REDUCTASE, mRNA sequence.
BE329703.1:93-127
TGCTTATGTTTATTTAGCAATAGAGGCTTT93GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
sq14a07.y1 Gm-c1046 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1046-781 5' similar to SW:PROC_SOYBN P17817 PYRROLINE-5-CARBOXYLATE REDUCTASE, mRNA sequence.
BE609651.1:452-486
TGCTTATGTTTATTTAGCAATAGAGGCTNT452GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTNTCATTAAGTCTAGCTTCTCATACTG
sr60e06.y1 Gm-c1052 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1052-155 5' similar to SW:PROC_SOYBN P17817 PYRROLINE-5-CARBOXYLATE REDUCTASE, mRNA sequence.
BE803568.1:204-238
TGCTTATGTTTATTTAGCAATAGAGGCTTT204GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
saf65c03.y1 Gm-c1078 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1078-894 5' similar to SW:PROC_SOYBN P17817 PYRROLINE-5-CARBOXYLATE REDUCTASE, mRNA sequence.
BI315935.1:5-39
CTTT5GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
s13dNF85E09VI071_471458 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence.
CX522827.1:330-364
TGCTTATATTTATTTAGCAATAGAAGCTCT330GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
s13dNF91C02VI018_471576 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence.
CX522886.1:405-439
TGCTTATATTTATTTAGCAATAGAAGCTCT405GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
Glycine max cDNA, clone: GMFL02-23-C23, 3'end.
DB981058.1:66-100
TGCTTATGTTTATTTAGCAATAGAGGCTTT66GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
ALF(R)--22_2007-08-21_1/ALF(R)-22_F13_030_1 Alfalfa (Medicago sativa) Trichome isolated from the stem Medicago sativa cDNA, mRNA sequence.
EX521637.1:646-680
TGCTTATATTTATTTAGCAATAGAGGCTCT646GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
ALF-R-3_2007-07-16_1/ALF(R)-3_E07_014_1 Alfalfa (Medicago sativa) Trichome isolated from the stem Medicago sativa cDNA, mRNA sequence.
EX525188.1:643-677
TGCTTATATTTATTTAGCAATAGAGGCTCT643GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
MTGland_A047_2007-07-07/MTGlandA047_H12_041_1 Medicago truncatula A17 glandular trichome Medicago truncatula cDNA, mRNA sequence.
EX528936.1:692-726
TGCTTATATTTATTTAGCAATAGAAGCTCT692GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCNNACTG
METBF31TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY478532.1:645-679
TGCTTATATTTATTTAGCAATAGAAGCTCT645GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
MOOFJ55TF MOO Vigna unguiculata cDNA 5', mRNA sequence.
FF400104.1:161-195
TGCGTACATTTATTTAGCAATAGAAGCTTT161GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
MOPDD78TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF541768.1:130-164
TGCGTACATTTATTTAGCAATAGAAGCTTT130GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
UCRVU05_CCNN18148_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN18148.b1, mRNA sequence.
FG852678.1:250-284
TGCGTACATTTATTTAGCAATAGAAGCTTT250GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Glycyrrhiza uralensis cDNA, clone: kanzou001BF08.f1, 5'-end sequence.
FS268057.1:625-659
TGCTTATATTTATTTAGCAATAGAGGCTCT625GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAGACTG
Glycyrrhiza uralensis cDNA, clone: kanzou007BA04.f1, 5'-end sequence.
FS269873.1:645-679
TGCTTATATTTATTTAGCAATAGAGGCTCT645GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAGACTG
Glycyrrhiza uralensis cDNA, clone: kanzou022DE01.f1, 5'-end sequence.
FS274523.1:589-623
TGCTTATATTTATTTAGCAATAGAGGCTCT589GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAGACTG
Glycyrrhiza uralensis cDNA, clone: kanzou050CA07.f1, 5'-end sequence.
FS283086.1:628-662
TGCTTATATTTATTTAGCAATAGAGGCTCT628GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAGACTG
Glycyrrhiza uralensis cDNA, clone: kanzou058CB10.f1, 5'-end sequence.
FS285658.1:636-670
TGCTTATATTTATTTAGCAATAGAGGCTCT636GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAGACTG
MEUBH13TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence.
GE348319.1:443-477
TGCTTATATTTATTTAGCAATAGAAGCTCT443GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
METC964TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
GT138414.1:590-624
TGCTTATATTTATTTAGCAATAGAAGCTCT590GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
METCD33TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
GT138739.1:591-625
TGCTTATATTTATTTAGCAATAGAAGCTCT591GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
Kudzu-Sub-06_2008-01-31_1/Kudzu-Sub-06_D03_007_1 Kudzu subtraction cDNA library Pueraria montana var. lobata cDNA, mRNA sequence.
HO704920.1:294-328
TGCTTATATTTATTTAGCAATAGAGGCTTT294GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGACCTTTCATTAAGTCTAGCTTCTCAAACAG
vsu-ars_010993_LI10Contig_10732 VSU-ARS-L10 Phaseolus acutifolius cDNA, mRNA sequence.
HO785960.1:654-688
TGCGTACATTTATTTAGCAATAGAAGCTTT654GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
TSA: Medicago sativa cultivar Chilean F0D_1518 mRNA sequence.
JL867972.1:673-707
TGCTTATATTTATTTAGCAATAGAGGCTCT673GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCACTAAGTCTAGCTTCTCAGACTG
TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_10057 mRNA sequence.
JL891234.1:459-493
TGCTTATATTTATTTAGCAATAGAGGCTCT459GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTG
Vigna unguiculata VuP5CR mRNA, complete cds.
AB056453.1:677-711
TGCGTACATTTATTTAGCAATAGAAGCTTT677GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:30553413-30553447
TGCGTACATTTATTTAGCAATAGAAGCTTT30553413GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG
Cyamopsis tetragonoloba pyrroline-5-carboxylate reductase (P5CR) mRNA, partial cds.
ON256684.1:163-197
TGCCTATATTTATTTAGCAATAGAGGCTTT163GGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTATCATTAAGTCTAGCTTCTCAAACTG
Glycine max mRNA for pyrroline-5-carboxylate reductase.
X16352.1:630-664
TGCTTATGTTTATTTAGCAATAGAGGCTTT630GGCTGATGGAGGAGTAGCAGCTGGTTTACCACGTGATCTTTCATTAAGTCTAGCTTCTCAAACTG

Data Export:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACGTGGTARACCAGCTGCTACTCCTCCATCAGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACGTGGTARACCAGCTGCTACTCCTCCATCAGCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.072 | 1.062 | search_plus_done; http://172.18.8.135:50400/match?q=CACGTGGTARACCAGCTGCTACTCCTCCATCAGCC&k=0&no_gap=0&offset=0&limit=50
3.021 | 1.950 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTGATGGAGGAGTAGCAGCTGGTYTACCACGTG&k=0&no_gap=0&offset=0&limit=27
3.050 | 0.028 | cgi_end;

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