GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-03 02:25:44, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scutellaria galericulata genome assembly, chromosome: 1.
OX335784.1:21841862-21841881
CACATAATATTAACTTATTACAGACATTTC21841862CACTCAAACATAACAATCATAAAAAAATGGGGGAAGATAAATATAAGTTC
Scutellaria minor genome assembly, chromosome: 2.
OX940726.1:22716943-22716962
CACATAATATTAACTTATTACAGACATTTC22716943CACTCAAACATAACAATCATAAAAGGGGGGGGGGGGGGAAGATAAATATA
Matricaria chamomilla var. recutita genome assembly, chromosome: 7_2.
OY720582.1:63719263-63719282
AACCAAGTTAAAAAAGTATTTTGTTTAAGC63719263CACTCAAACATAACAATCATCTAATAATAGAACACTTCAAAACAATTAGT
Camellia sinensis genome assembly, chromosome: 13.
OZ007456.1:79520101-79520120
TCACAGGCTTATTTTTCTCAGTTTCTTCTT79520101CACTCAAACATAACAATCATTCAATTCAATTCGATCTAATCAAATATAAA
Camellia sinensis genome assembly, chromosome: 13.
OZ007486.1:85219142-85219161
TCACAGGCTTATTTTTCTCAGTTTCTTCTT85219142CACTCAAACATAACAATCATTCAATTCAATTCGATCTAATCAAATATAAA
Matricaria chamomilla genome assembly, chromosome: 6.
OZ174301.1:79915119-79915138
AACCAAGTTAAAAAAGTATTTTGTTTAAGC79915119CACTCAAACATAACAATCATCTAATAATAGAACACTTCAAAACAATTAGT
Prehensilosergia prehensilis voucher HBG8513 ATP synthase subunit a (ATP6) gene, partial cds; mitochondrial.
MZ404942.1:196-215
TTAGAATTTAAAACTCTTCTAGGACCTCAA196CACTCAAACATAACAATCATATTTGTATCATTATTTAGACTTATTGTATT
Pammene fasciana genome assembly, chromosome: 6.
OU452278.1:11298837-11298856
GTGTTAAATTTCATTTGGTTTATAGTGTGA11298837CACTCAAACATAACAATCATAATTGGTTAGCATCCAATATCATTTGTTCA
Xylocampa areola genome assembly, chromosome: 15.
OW285214.1:2741480-2741499
CTAATAAAAAAGATAATTACAAACAGCATT2741480CACTCAAACATAACAATCATACAAAAACGCACAAACATTACTTAAGAAAC
Orthosia gracilis genome assembly, chromosome: Z.
OX387268.1:41020577-41020596
AAGAACCGTTTACGGTTTATCTGCGATACC41020577CACTCAAACATAACAATCATACAACCACACTAACATGCAAACATACGAAC
Clavelina lepadiformis genome assembly, chromosome: 7.
OX392445.1:13567143-13567162
ACATTCTACTTTCTTCTTTATCCTTGCGTG13567143CACTCAAACATAACAATCATGTGCTTTGCACTTGACCGGTTGCTTCTTCA
Catostylus mosaicus genome assembly, chromosome: 16.
OZ025199.1:6821029-6821048
TTAATCACTTTTAATTAATCGATCGATATA6821029CACTCAAACATAACAATCATCTCATCCAATCAAACAATCAAATTGCTTTT
Thalassophryne amazonica genome assembly, chromosome: 1.
LR722966.1:84564616-84564635
TGTGTGTGTGTGCTAATTGCTACACATTTC84564616CACTCAAACATAACAATCATCTGAACTCAGACTGCACATGTGAAAACACA
SDSS2_11 SDSS2 Camellia sinensis var. sinensis cDNA clone P11 5', mRNA sequence.
GH710840.1:222-241
ATTAGATCGAATTGAATTGAATTGAATTGA222ATGATTGTTATGTTTGAGTGAAGAAGAAACTGAGAAAAAAAAAAAAAAAA
Tea008_2005-10-27_1/Tea008_E05_020_1 Camellia sinensis (tea) cultivar DT1 EST library Camellia sinensis cDNA, mRNA sequence.
JK478812.1:176-195
ATTAGATCGAATTGAATTGAATTGAATTGA176ATGATTGTTATGTTTGAGTGAAGAAGAAACTGAGA
Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
AP015037.1:21026109-21026128
ATTGTTTATGATGAGTTTGGTATGTTTTGA21026109ATGATTGTTATGTTTGAGTGTTTTTGATTGATTTTATGTTGATTAAGGGA
Matricaria chamomilla var. recutita genome assembly, chromosome: 5.
OY992050.1:241177501-241177520
TTGTTGTTGCAAGCCGTAGAAGATTATGAG241177501ATGATTGTTATGTTTGAGTGTGGCGGTTTTCGGGATGAATCATATGGTCC
Camellia sinensis genome assembly, chromosome: 13.
OZ007456.1:79513898-79513917
TTTACATTTGATTAGATCGAATTGAATTGA79513898ATGATTGTTATGTTTGAGTGAAGAAGAAACTGAGAAAAATCAGCCTGTGA
Camellia sinensis genome assembly, chromosome: 11.
OZ007469.1:75138004-75138023
TCCAAACCCAACAAGGCTTACTTATCCGAA75138004ATGATTGTTATGTTTGAGTGTATTGAAAAACACACTGTTTGATTTTATTT
Camellia sinensis genome assembly, chromosome: 13.
OZ007471.1:86586575-86586594
TTTACATTTGATTAGATCGAATTGAATTGA86586575ATGATTGTTATGTTTGAGTGAAGAAGAAACTGAGAAAAATCAGCCTGTGA
Camellia sinensis genome assembly, chromosome: 13.
OZ007486.1:85211008-85211027
TTTACATTTGATTAGATCGAATTGAATTGA85211008ATGATTGTTATGTTTGAGTGAAGAAGAAACTGAGAAAAATCAGCCTGTGA
Draba verna genome assembly, chromosome: 2.
OZ174219.1:43939673-43939692
TGCAGATGAGATTTGGAGACCTAAATCTTA43939673ATGATTGTTATGTTTGAGTGAAAAAGGCTAATTATCTTATGATACAAGGA
Matricaria chamomilla genome assembly, chromosome: 4.
OZ174299.1:42533552-42533571
TTGTTGTTGCAAGCCGTAGAAGATTATGAG42533552ATGATTGTTATGTTTGAGTGTGGCGGTTTTCAGGATGAATCATATGGTCC
Omalotheca supina genome assembly, chromosome: 12.
OZ182158.1:23870352-23870371
TGATTGTTGCTTTTTAGAGAATGTTTCATG23870352ATGATTGTTATGTTTGAGTGGGTTTTGTTTTGTTTGGTGTGAAAAAAGAA
Tripolium pannonicum genome assembly, chromosome: 2.
OZ219251.1:587433311-587433330
TGTGAATCAACCAACAAGATGTCAGAAACA587433311ATGATTGTTATGTTTGAGTGCTCATCTACCTCCATGGAGTCTACAAATAC
Phorcus lineatus genome assembly, chromosome: 12.
OV121092.1:33999223-33999242
ATCAAGGACCTTGCCAGGAGATGCTAGAAA33999223ATGATTGTTATGTTTGAGTGTTTTTATGAGCGATTCCCTTAAGTTAACGA
Apamea sublustris genome assembly, chromosome: 16.
OZ182109.1:6955588-6955607
GTACTGCGTTGACTAACTTGTTTATATTGA6955588ATGATTGTTATGTTTGAGTGAACGCTTTTGTTGAGAATATTTCTGATGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACTCAAACATAACAATCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTCAAACATAACAATCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.254 | 0.245 | search_plus_done; http://172.18.8.135:50800/match?q=CACTCAAACATAACAATCAT&k=0&no_gap=0&offset=0&limit=50
0.643 | 0.389 | search_minus_done; http://172.18.8.135:50800/match?q=ATGATTGTTATGTTTGAGTG&k=0&no_gap=0&offset=0&limit=37
0.652 | 0.010 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).