GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 20:47:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Elaeis guineensis isotig08694.Elguifruit mRNA sequence.
JO095924.1:353-376
AACGACCGGAAAGTAGTAGGATTCGCTGTC353CACTCGCGGATGGATTCTGAGTTATAGCTCGAGCTACCAACCGTTAAAGTGCAG
Elaeis guineensis EST, clone (6lib)_isotig07326.
LM617345.1:1576-1599
CTGCACTTTAACGGTTGGTAGCTCGAGCTA1576TAACTCAGAATCCATCCGCGAGTGGACAGCGAATCCTACTACTTTCCGGTCGTT
Elaeis guineensis putative hydroxycinnamoyl transferase (HCT) mRNA, partial cds.
KC146061.1:1176-1199
CTGCACTTTAACGGTTGGTAGCTCGAGCTA1176TAACTCAGAATCCATCCGCGAGTGGACAGCGAATCCTACTACTTTCCGGTCGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACTCGCGGATGGATTCTGAGTTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTCGCGGATGGATTCTGAGTTA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.147 | 0.138 | search_plus_done; http://172.18.8.135:50400/match?q=CACTCGCGGATGGATTCTGAGTTA&k=0&no_gap=0&offset=0&limit=50
0.472 | 0.325 | search_minus_done; http://172.18.8.135:50400/match?q=TAACTCAGAATCCATCCGCGAGTG&k=0&no_gap=0&offset=0&limit=49
0.473 | 0.002 | cgi_end;

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