GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-10 06:10:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CA00-XX-IC1-001-G02-EC.F Coffea arabica IC1 Coffea arabica cDNA clone CA00-XX-IC1-001-G02-EC, mRNA sequence.
GW461969.1:249-271
ATACTTCTCCTTACCTTTCTGTGACCATTT249GCTGCCAGAAAAATGTTGCAGTGAGCTCTTTCCCCTTACCTATACGTGTGCAT
CA00-XX-FR2-083-G05-EQ.F Coffea arabica FR2 Coffea arabica cDNA clone CA00-XX-FR2-083-G05-EQ, mRNA sequence.
GW489421.1:197-219
ATACTTCTCCTTACCTTTCTGTGACCATTT197GCTGCCAGAAAAATGTTGCAGTGAGCTCTTTCCCCTTACCTATACNTGTGCAT
CPCM-11 Coffee microsatellite sequence Coffea canephora STS genomic, sequence tagged site.
BV722912.1:407-429
ATACTTCTCCTTACCTTTCTGTGACCATTC407GCTGCCAGAAAAATGTTGCAGTGAGCTCTTTCCCCTTAACCTATACGTGTGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CACTGCAACATTTTTCTGGCAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTGCAACATTTTTCTGGCAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=CACTGCAACATTTTTCTGGCAGC&k=0&no_gap=0&offset=0&limit=50
0.267 | 0.175 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGCCAGAAAAATGTTGCAGTG&k=0&no_gap=0&offset=0&limit=50
0.270 | 0.002 | cgi_end;

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