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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-14 15:46:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sciurus carolinensis genome assembly, chromosome: 6.
LR738595.1:14416881-14416900
ACAGCCCAAACAGGACGGGGATGCACAGCA14416881CACTGTGACCACATTTGCTGGCTGGTTGGCTTGTCCCATGTGTCTTTCCG
Danio aesculapii genome assembly, chromosome: 2.
LR812511.1:20283303-20283322
TTGCTTAAACACTTTAGACTAAAACATTTA20283303CACTGTGACCACATTTGCTGGTTTCCCCTGTCCATATGCAGATTGCCCAT
sh52f08.y1 Gm-c1017 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1017-5344 5', mRNA sequence.
AW423845.1:202-221
TTAGGTAACAACCACCGTCTATTGTCAGTG202CACTGTGACCACATTTGCTGTTTTTTTTTTTCCCTTGTGTGTTTCTTGCT
Schistosoma mattheei genome assembly, chromosome: 3.
OX103945.1:38735920-38735939
GTCGAGATCTATAAAAGGTGTCTTCTTATT38735920CACTGTGACCACATTTGCTGTTTTGAGTTTTCTTATATTTATCAAGTAAT
Thalpophila matura genome assembly, chromosome: 18.
OX419194.1:5605110-5605129
AAACAGGTCCTGAGCGTCATCATTATTGTC5605110CACTGTGACCACATTTGCTGCTTTCCCATCTGAACGGCTCGGGCTGGGCC
Thalpophila matura genome assembly, chromosome: 19.
OX419195.1:4357607-4357626
GGCCCAGCCCGAGCCGTTCAGATGGGAAAG4357607CAGCAAATGTGGTCACAGTGGACAATAATGATGACGCTCAGGACCTGTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CACTGTGACCACATTTGCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CACTGTGACCACATTTGCTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.944 | 0.935 | search_plus_done; http://172.18.8.135:50400/match?q=CACTGTGACCACATTTGCTG&k=0&no_gap=0&offset=0&limit=50
1.557 | 0.613 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCAAATGTGGTCACAGTG&k=0&no_gap=0&offset=0&limit=45
1.558 | 0.001 | cgi_end;

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