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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 07:32:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Geotrypetes seraphini genome assembly, chromosome: 4.
LR699149.1:97149747-97149767
AGGTGGGAAAGTGCTACTCTTGGTGTACGG97149747CAGAAGAAGCAGTAGCAGCAACAGTTGGGTTGTCAGGTGGTTCTCTTGTGT
KR 1020230004647-A/1: BACTERIAL STRAINS FOR USE AS PROBIOTICS, COMPOSITIONS THEREOF, DEPOSITED STRAINS AND METHOD TO IDENTIFY PROBIOTIC BACTERIAL STRAINS.
PE288576.1:626236-626256
CCATGCTCCGTTAATTGCTGTATAGAGATT626236CAGAAGAAGCAGTAGCAGCAATACAAAGAGAAAGAATAACGAAATGTTTTT
RFAA068TV Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAA068, mRNA sequence.
EE254642.1:400-420
CTAAAACAGAATCTGAAATAAAACTGGAAG400CAGAAGAAGCAGTAGCAGCAAAGAGTACCATCAACAACAAAAAGAAAAGAC
RFAB613TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFAB613, mRNA sequence.
EE259889.1:665-685
CTAAAACAGAATCTGAAATAAAACTGGAAG665CAGAAGAAGCAGTAGCAGCAAAGAGTACCATCAACAACAAAAAGAAAAGAC
VCOS13NG_T3_003_C11_29MAR2007_091 VCOS13NG Vaccinium corymbosum cDNA, mRNA sequence.
JK658640.1:3-23
TT3CAGAAGAAGCAGTAGCAGCAAACACAGATTACAAATACACAGCGTCGTCAA
Quercus robur genome assembly, chromosome: 5.
OW028769.1:60062196-60062216
AAAAAAAAAATCCCGTAGGCCAGCAGAACC60062196CAGAAGAAGCAGTAGCAGCAAATCAAAAAAAAATTTCTTTCCTTCGAGTAA
Flavobacterium sp. N502540 chromosome, complete genome.
CP110012.1:1738121-1738141
CCACGCTCCGTTAATTGCTGTATAGAGATT1738121CAGAAGAAGCAGTAGCAGCAATACAAAGAGAAAGAATAACGAAATGTTTTT
Anopheles coustani genome assembly, chromosome: 2.
OX030900.2:47756176-47756196
AATTGCGAGCACAGGAATTCGACGATATCG47756176CAGAAGAAGCAGTAGCAGCAACAGTGGTGCTGATGATTGTAAACGATTGGA
Anopheles ziemanni genome assembly, chromosome: 2.
OX030919.2:47756176-47756196
AATTGCGAGCACAGGAATTCGACGATATCG47756176CAGAAGAAGCAGTAGCAGCAACAGTGGTGCTGATGATTGTAAACGATTGGA
Lumbricus terrestris genome assembly, chromosome: 16.
OX457051.1:41450869-41450889
CCATTGCGATGCGATGATCCACCGCTGCAG41450869CAGAAGAAGCAGTAGCAGCAACCGCCGCTACCGAGTAGTACGACCGCCGCC
Epistrophe eligans genome assembly, chromosome: 1.
OX596028.1:3784546-3784566
GATGCAATGGACGGGCTGGAGAGCCAACAG3784546CAGAAGAAGCAGTAGCAGCAAGTCCATGATGGTTTGGTTATATTCGTTGGA
Octopus vulgaris genome assembly, chromosome: 10.
OX597823.1:21760834-21760854
CAACAACAACAACAACATTAGCAGCAACAG21760834CAGAAGAAGCAGTAGCAGCAACTGCTGTCAACTTTTCTTAACTAGCCACAA
Dryomyza anilis genome assembly, chromosome: 3.
OX638132.1:49312092-49312112
CCACAGCGGACACACCATAGAGTGTGTGGC49312092CAGAAGAAGCAGTAGCAGCAACAAAAGCAACGATAGAAGAAGCACATGTAG
Sepiola atlantica genome assembly, chromosome: 2.
OY744516.1:88920200-88920220
TTGTCTAGTCGTCGAGCCCAGAAGCAGCAG88920200CAGAAGAAGCAGTAGCAGCAAATAGACTGCCCTTAAATTAGCTGTAGCTAA
Meles meles genome assembly, chromosome: 4.
OV277444.1:55213585-55213605
ATCTCCTACCTGTTTCTGGAGCTTTTGCTT55213585TTGCTGCTACTGCTTCTTCTGCTGCTGCTGCTGCTTCTTCGTCTTCTTCTT
Furcifer pardalis isolate Fpa_1 chromosome 3.
CP126892.1:76112440-76112460
CTAAGCTGATCTCTCCACATTTTCTCTGTA76112440TTGCTGCTACTGCTTCTTCTGCCTCATACTCTACTACAGTACTTAATAAGA
Microcaecilia unicolor genome assembly, chromosome: 7.
LR594638.1:261048676-261048696
CCAGAAGAATGGTGACAATAGAGGTTGACT261048676TTGCTGCTACTGCTTCTTCTGCTACTTTTCATTCAGTTTCACAGATGAATT
Sprattus sprattus genome assembly, chromosome: 6.
OY735290.1:4659922-4659942
CCCCTCAAAGCTTATTATTAGAAGCCATTA4659922TTGCTGCTACTGCTTCTTCTGCTGCTCCTGTTACCTATATGGGTTTCGTGA
RFABE12TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABE12, mRNA sequence.
EE258856.1:306-326
GTCTTTTCTTTTTGTTGTTGATGGTACTCT306TTGCTGCTACTGCTTCTTCTGCTTCCAGTTTTATTTCAGATTCTGTTTTAG
RFABQ03TH Castor bean cDNA library from flowers,800bp Ricinus communis cDNA clone RFABQ03, mRNA sequence.
EE260610.1:314-334
GTCTTTTCTTTTTGTTGTTGATGGTACTCT314TTGCTGCTACTGCTTCTTCTGCTTCCAGTTTTATTTCAGATTCTGTTTTAG
RCLG355TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLG355, mRNA sequence.
EG662751.1:167-187
GTCTTTTCTTTTTGTTGTTGATGGTACTCT167TTGCTGCTACTGCTTCTTCTGCTTCCAGTTTTATTTCAGATTCTGTTTTAG
LINN_XX_110_C06_LINN110.CR_C06 R. communis developing seed Ricinus communis cDNA, mRNA sequence.
GE635658.1:211-231
GTCTTTTCTTTTTGTTGGTGAGGGTACTCT211TTGCTGCTACTGCTTCTTCTGCTTCCAGTTTTATTTCAGATTCTGTTTTAG
Quercus dentata isolate Qdleaves-2020 chromosome 5.
CP116448.1:62160453-62160473
GTTACTCGAAGGAAAGAATTCTTTTTTGAT62160453TTGCTGCTACTGCTTCTTCTGGGTTCTGCTGGCCAACGGGATTTTTTTTTT
Quercus variabilis isolate HB chromosome 5b.
CP129437.1:57711631-57711651
TCAAAGGAAAGAATTTTTTTTTTTTTTGAT57711631TTGCTGCTACTGCTTCTTCTGGGTTCTGGCCAACGGGATATATATATATCT
Quercus variabilis isolate HB chromosome 5a.
CP129449.1:58836340-58836360
CTGATCAAAGGAAATAAATTTTTTTTTGAT58836340TTGCTGCTACTGCTTCTTCTGGGTTCTGGCCAACGGGATCTTTTTTTTTTT
Quercus variabilis isolate HB chromosome 5a.
CP129449.1:58866736-58866756
CTCCTCACCTTTGCTTCTTTGACACTTGAT58866736TTGCTGCTACTGCTTCTTCTGGGTTCTGGGCCATCTGGCCAACGGGAATTT
Quercus cerris genome assembly, chromosome: 3.
OY770008.1:57284715-57284735
GATCAAAGGAAAGAATTTTTTTTTTTTGAT57284715TTGCTGCTACTGCTTCTTCTGGGTTCTGGCCAACGGGATTTTTTTTTTTTT
Quercus cerris genome assembly, chromosome: 3.
OY770008.1:57312029-57312049
CTCCTCACCTTTGCTTCTTTGACACTTGAT57312029TTGCTGCTACTGCTTCTTCTGGGTTCTGGGCCTTCTGGCCAACGGGAATTT
Fusobacteria bacterium ZRK30 chromosome 1, complete sequence.
CP102404.1:144670-144690
TAGTACCTACTATATCTACTCCTGCTGCTG144670TTGCTGCTACTGCTTCTTCTGCACAGGAAATGTCTGCCATGATAAGTTGAT
Mya arenaria isolate MELC-2E11 chromosome 1.
CP111012.1:9328721-9328741
CTACTACTACTACTGCTCTTGCTACTGCTA9328721TTGCTGCTACTGCTTCTTCTGAATCTGCGACTGCTGCTGCTGCTGCTGCTG
Nowickia ferox genome assembly, chromosome: 2.
OW387024.1:89439815-89439835
ACGCTGTCGTTAGTAAATTTACTGCCAGTA89439815TTGCTGCTACTGCTTCTTCTGTTGCTGTTGCTGTTGCTGCAACCATGCGTT
Toxonevra muliebris genome assembly, chromosome: 1.
OY829326.1:14497516-14497536
GTTTAGTTGTTGATGCAACTAATGGATGCT14497516TTGCTGCTACTGCTTCTTCTGCTGCAACAGCCAAACACCCAGCCAATTGTG
Toxonevra muliebris genome assembly, chromosome: 3.
OY829328.1:82861730-82861750
TTGATGAAGTAGTTGTTGTTGTTAATGTTG82861730TTGCTGCTACTGCTTCTTCTGTGTGCTTGTAGTCATCATAACCACTGCCAT
Dichetophora obliterata genome assembly, chromosome: 1.
OY986435.1:276247749-276247769
TTCCCGCTTAGCTGCAGTTCCATGCTATTT276247749TTGCTGCTACTGCTTCTTCTGTTGTTGCTGCTATTAAAATGTCGTCTTACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGAAGAAGCAGTAGCAGCAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGAAGAAGCAGTAGCAGCAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.744 | 0.736 | search_plus_done; http://172.18.8.135:50400/match?q=CAGAAGAAGCAGTAGCAGCAA&k=0&no_gap=0&offset=0&limit=50
1.431 | 0.687 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCTGCTACTGCTTCTTCTG&k=0&no_gap=0&offset=0&limit=36
1.444 | 0.013 | cgi_end;

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