GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 07:40:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 2, clone: LjT07O13, TM0660.
AP007497.2:45032-45052
TTGGTTGGGATATGAAAATAAATTCAAAAT45032CAGAAGCGAGAAATATCAAACAAATACATCAAACCCAGAAAGAAAAGGGGT
Digitaria exilis genome assembly, chromosome: 2A.
LR994606.1:38072832-38072852
GGGCTAAGTTGTGCTTGCCTCTACTGTCAA38072832CAGAAGCGAGAAATATCAAACTTCTTCCTGCATTCAAGATTCCAACACAGC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:67651307-67651327
ACCCCTTTTCTTTCTGGGTTTGATGTATTT67651307GTTTGATATTTCTCGCTTCTGATTTTGAATTTATTTTCATATCCCAACCAA
Anisus vortex genome assembly, chromosome: 11.
OX421502.1:4106562-4106582
TATAGTGTTGAGGTACATGATGTAATCAAA4106562GTTTGATATTTCTCGCTTCTGCCATTTCTGTGTCATGTTGGACAATTTGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGAAGCGAGAAATATCAAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGAAGCGAGAAATATCAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=CAGAAGCGAGAAATATCAAAC&k=0&no_gap=0&offset=0&limit=50
0.114 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTGATATTTCTCGCTTCTG&k=0&no_gap=0&offset=0&limit=48
0.115 | 0.001 | cgi_end;

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