GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:20:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

QGC14B24.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC14B24, mRNA sequence.
BQ859837.1:187-206
GGATGTTATAAGTTTATCAATAACACCTAA187CAGACGTCCACCTGGAATTGCAACATTTTTTAATCCAATAGACATGGCGT
QGD6K07.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGD6K07, mRNA sequence.
BQ869596.1:162-181
GGATGTTATAAGTTTATCAATAACACCTAA162CAGACGTCCACCTGGAATTGCAACATTTTTTAATCCAATAGACATGGCGT
TSA: Lactuca sativa Letassy_X1_18353 mRNA sequence.
JI575247.1:1292-1311
GGATGTTATAAGTTTATCAATAACACCTAA1292CAGACGTCCACCTGGAATTGCAACATTTTTTAATCCAATAGACATGGCGT
TSA: Lactuca serriola Serrassy_T_P2_7970 mRNA sequence.
JO021945.1:1709-1728
ACGCCATGTCTATTGGATTAAAAAATGTTG1709CAATTCCAGGTGGACGTCTGTTAGGTGTTATTGATAAACTTATAACATCC
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:29523704-29523723
ATGCCATGTCTATTGGATTAAAAAAAGTAG29523704CAATTCCAGGTGGACGTCTGTTGGGTGTTATTGATAAACTTATAACATCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGACGTCCACCTGGAATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGACGTCCACCTGGAATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.129 | 0.121 | search_plus_done; http://172.18.8.135:50400/match?q=CAGACGTCCACCTGGAATTG&k=0&no_gap=0&offset=0&limit=50
0.156 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=CAATTCCAGGTGGACGTCTG&k=0&no_gap=0&offset=0&limit=47
0.157 | 0.001 | cgi_end;

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