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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:53:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CV01005B1A08.f1 CV01-normalized library Manihot esculenta cDNA clone CV01005B1A08.f1, mRNA sequence.
DV441846.1:142-168
AAAGAAGCCATTTCTGTTCATATCCAAAGC142CAGAGGAGTTGTAGTGGAAGAAGAAGAAGAAGAAGAAAGAGAAGCTGAGAAAGAAAG
CV01008A1E04.f1 CV01-normalized library Manihot esculenta cDNA clone CV01008A1E04.f1, mRNA sequence.
DV442725.1:138-164
AAAGAAGCCATTTCTGTTCATATCCAAAGC138CAGAGGAGTTGTAGTGGAAGAAGAAGAAGAAGAAGAAAGAGAAGCTGAGAAAGAAAG
CV02014A1C01.f1 CV02-normalized library Manihot esculenta cDNA clone CV02014A1C01.f1, mRNA sequence.
DV453790.1:149-175
AAAGAAGCCATTTCTGTTCATATCCAAAGC149CAGAGGAGTTGTAGTGGAAGAAGAAGAAGAAGAAGAAAGAGAAGCTGAGAAAGAAAG
CV02014B2H08.f1 CV02-normalized library Manihot esculenta cDNA clone CV02014B2H08.f1, mRNA sequence.
DV454107.1:150-176
AAAGAAGCCATTTCTGTTCATATCCAAAGC150CAGAGGAGTTGTAGTGGAAGAAGAAGAAGAAGAAGAAAGAGAAGCTGAGAAAGAAAG
U_SX-PL011N01_A_plate46n11.b1 Full-length enriched cDNA library of cassava MECU72 Manihot esculenta cDNA, mRNA sequence.
JG987247.1:266-292
AAAGAAGCCATTTCTGTTCATATCCAAAGC266CAGAGGAGTTGTAGTGGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGCTGAGAAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CAGAGGAGTTGTAGTGGAAGAAGAAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGAGGAGTTGTAGTGGAAGAAGAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.518 | 0.509 | search_plus_done; http://172.18.8.135:50400/match?q=CAGAGGAGTTGTAGTGGAAGAAGAAGA&k=0&no_gap=0&offset=0&limit=50
0.616 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTCTTCTTCCACTACAACTCCTCTG&k=0&no_gap=0&offset=0&limit=45
0.616 | 0.000 | cgi_end;

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