GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 20:44:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Arachis hypogaea CL4850Contig1.Arhy mRNA sequence.
EZ748922.1:58-77
TTTTATGAAGGGATTATTAATCTATAATTT58CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
TSA: Arachis hypogaea Ahy.Unigene9866 mRNA sequence.
JR550254.1:41-60
TAATTTTATGAAGGGATTAATCTATAACTT41CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:110944971-110944990
TAATTTTATGAAGGGATTAATCTATAACTT110944971CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:150599675-150599694
TTTTATGAAGGGATTATTAATCTATAATTT150599675CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:158167039-158167058
TTTTATGAAGGGATTATTAATCTATAATTT158167039CAGATATGCAAGGCCTAACTTATAATCCTGTCCCCTTAGATACTTTTTCC
TFL_105_G10_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-105_G10 5', mRNA sequence.
ES768451.1:237-256
GGAAAAAGTATCTAAGGGGACAGGATTATA237AGTTAGGCCTTGCATATCTGAAATTATAGATTAATAATCCCTTCATAAAA
TSA: Arachis duranensis DurSNP_c11377.Ardu mRNA sequence.
HP011365.1:686-705
GGAAAAAGTATCTAAGGGGACAGGATTATA686AGTTAGGCCTTGCATATCTGAAGTTATAGATTAATCCCTTCATAAAATTA
TSA: Arachis duranensis Aduranensis_small_c11114_2 mRNA sequence.
JR335407.1:228-247
GGAAAAAGTATCTAAGGGGACAGGATTATA228AGTTAGGCCTTGCATATCTGAAGTTATAGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGATATGCAAGGCCTAACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGATATGCAAGGCCTAACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=CAGATATGCAAGGCCTAACT&k=0&no_gap=0&offset=0&limit=50
0.221 | 0.104 | search_minus_done; http://172.18.8.135:50400/match?q=AGTTAGGCCTTGCATATCTG&k=0&no_gap=0&offset=0&limit=45
0.223 | 0.002 | cgi_end;

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