GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 18:36:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Danio kyathit genome assembly, chromosome: 24.
LR812542.1:35338047-35338066
ACATGCTACACCTTAGCAACACCTTTACAA35338047CAGCAAAGAAACATGCTAGAAACTACTTTAAACACCTTAGCAATACCATA
Lotus japonicus genomic DNA, chromosome 4, clone: LjB15O07, BM1698.
AP009629.1:53891-53910
AGAGAGAGAGAGAGAGAGAGAGAGAGAAGA53891CAGCAAAGAAACATGCTAGAGTATCTATTCAGGCAGGTGTAGAGAATATA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:62784302-62784321
TATATTCTCTACACCTGCCTGAATAGATAC62784302TCTAGCATGTTTCTTTGCTGTCTTCTCTCTCTCTCTCTCTCTCTCTCTCT
Hibiscus tridactylites genome assembly, chromosome: 5.
OY288269.1:49705754-49705773
CATGATTTTTAAATCTGTTTTGAAAGCATA49705754TCTAGCATGTTTCTTTGCTGAGATTTTAAGCCATGTGTTGAAGGAAGCTC
Calliphora vomitoria genome assembly, chromosome: X.
OW818034.2:1754972-1754991
ATCAGGCTTGATTAAATTAAATTATCATAA1754972TCTAGCATGTTTCTTTGCTGTGCCCTCGAGTCTGAGGCTGACGTCCATAC
Amaurobius ferox genome assembly, chromosome: 14.
OX578149.1:125422787-125422806
CACAGTAACTGTATTCTAATTAAGTAATAT125422787TCTAGCATGTTTCTTTGCTGTTTTATTCATTCTAATATATAAAATATGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCAAAGAAACATGCTAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCAAAGAAACATGCTAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCAAAGAAACATGCTAGA&k=0&no_gap=0&offset=0&limit=50
0.121 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TCTAGCATGTTTCTTTGCTG&k=0&no_gap=0&offset=0&limit=48
0.123 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).