GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:47:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RTK1_14_C09.b1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_14_C09_A029 3', mRNA sequence.
CO364166.1:201-224
CAACCTTGGTCTGAATCTCAGCAAACTTGA201CAGCAATGTGGCAAGTGTGACAATCCAACACAGGGGCATAACCATTTCCAATCT
RTK1_14_C09.g1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_14_C09_A029 5', mRNA sequence.
CO364247.1:656-679
CAACCTTGGTCTGAATCTCAGCAAACTTGA656CAGCAATGTGGCAAGTGTGACAATCCAACACAGGGGCATAACCATTTCCAATCT
Pinus pinaster bud EST.
CT575949.1:126-149
AGATTGGAAATGGTTATGCCCCTGTGTTGG126ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAGATCATGACCAAGGTTG
Pinus pinaster bud EST.
CT581402.1:548-571
AGATTGGAAATGGTTATGCCCCTGTGTTGG548ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAGATCATGACCAAGGTTG
VCDC14936 Daucus carota subsp. sativus B493_2+kb Daucus carota subsp. sativus cDNA clone CAR03_002_B21 5', mRNA sequence.
JG767974.1:203-226
AGATTGGAAACGGATATGCTCCAGTGCTTG203ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAAATCCAAACCAAGATTG
VCDC14984 Daucus carota subsp. sativus B493_2+kb Daucus carota subsp. sativus cDNA clone CAR03_002_D22 5', mRNA sequence.
JG768022.1:203-226
AGATTGGAAACGGATATGCTCCAGTGCTTG203ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAAATCCAAACCAAGATTG
VCDC15333 Daucus carota subsp. sativus B493_2+kb Daucus carota subsp. sativus cDNA clone CAR03_003_D13 5', mRNA sequence.
JG768371.1:203-226
AGATTGGAAACGGATATGCTCCAGTGCTTG203ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAAATCCAAACCAAGATTG
VCDC15542 Daucus carota subsp. sativus B493_2+kb Daucus carota subsp. sativus cDNA clone CAR03_003_N14 5', mRNA sequence.
JG768580.1:203-226
AGATTGGAAACGGATATGCTCCAGTGCTTG203ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAAATCCAAACCAAGATTG
Daucus carota subsp. sativus cultivar DH1 chromosome 4.
CP093346.1:29474870-29474893
AGATTGGAAACGGATATGCTCCAGTGCTTG29474870ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAAATCCAAACCAAGATTG
Daucus carota isolate Kuroda chromosome 4.
CP125304.1:17321824-17321847
AGATTGGAAACGGATATGCTCCAGTGCTTG17321824ATTGTCACACTTGCCACATTGCTGTCAAGTTTGCTGAAATCCAAACCAAGATTG
Hedera helix genome assembly, chromosome: 8.
OX359271.1:32561656-32561679
AGATTGGAAATGGCTATGCTCCAGTTCTTG32561656ATTGTCACACTTGCCACATTGCTGTTAAGTTTGCTGAAATTCTGACCAAGATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCAATGTGGCAAGTGTGACAAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCAATGTGGCAAGTGTGACAAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.190 | 0.181 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCAATGTGGCAAGTGTGACAAT&k=0&no_gap=0&offset=0&limit=50
0.871 | 0.681 | search_minus_done; http://172.18.8.135:50400/match?q=ATTGTCACACTTGCCACATTGCTG&k=0&no_gap=0&offset=0&limit=48
0.877 | 0.006 | cgi_end;

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