GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:17:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus DNA, clone:LjT57o11_not.
AG263450.1:348-368
AATCTGAAAATCCATTTAAGATTTTATTAT348CAGCATGCGCATGTTAAGTATATTTCATTATCTACCAAATGTTGTTTTTTT
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:1192708-1192728
AATCTGAAAATCCATTTAAGATTTTATTAT1192708CAGCATGCGCATGTTAAGTATATTTCATTATCTACCAAATGTTGTTTTTTT
Lotus japonicus genomic DNA, chromosome 6, clone: LjB23G22, BM1714.
AP010555.1:8500-8520
AAAAAAACAACATTTGGTAGATAATGAAAT8500ATACTTAACATGCGCATGCTGATAATAAAATCTTAAATGGATTTTCAGATT
Lotus japonicus genomic DNA, chromosome 6, clone: LjB02L14, BM1999.
AP010556.1:41193-41213
AAAAAAACAACATTTGGTAGATAATGAAAT41193ATACTTAACATGCGCATGCTGATAATAAAATCTTAAATGGATTTTCAGATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CAGCATGCGCATGTTAAGTAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CAGCATGCGCATGTTAAGTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=CAGCATGCGCATGTTAAGTAT&k=0&no_gap=0&offset=0&limit=50
0.109 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=ATACTTAACATGCGCATGCTG&k=0&no_gap=0&offset=0&limit=48
0.110 | 0.001 | cgi_end;

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